BS29616.complete Sequence
344 bp assembled on 2012-05-25
GenBank Submission: KX801319
> BS29616.complete
GAAGTTATCAGTCGACATGACGCTCACCTACTGGATCGGCATGATCATCG
GTCCGCCTAGAACACCATTCGAGAATCGAATGTATTCACTAAAGATCGAG
TGCGGCGAACGCTATCCGGATGAGCCACCAACGCTCCGGTTTATAACTAA
AGTAAACATTAACTGCATTAATCAGAACAATGGCGTGGTTGATCATAGAT
CAGTTCAGATGTTGGCCAGATGGAGTCGCGAGTACAATATAAAAACGATG
CTGCAGGAAATCCGTAGGATTATGACCATGAAAGAGAACCTGAAGCTGGC
ACAGCCGCCAGAAGGTAGCTGTTTTTAGAAGCTTTCTAGACCAT
BS29616.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:31:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Uev1A-RC | 438 | CG10640-PC | 123..438 | 13..328 | 1580 | 100 | Plus |
Uev1A-RA | 438 | CG10640-PA | 123..438 | 13..328 | 1580 | 100 | Plus |
Uev1A-RB | 312 | CG10640-PB | 1..312 | 17..328 | 1560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:31:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Uev1A-RC | 1189 | CG10640-RC | 149..464 | 13..328 | 1580 | 100 | Plus |
Uev1A-RB | 1609 | CG10640-RB | 303..618 | 13..328 | 1580 | 100 | Plus |
Uev1A-RA | 1196 | CG10640-RA | 192..507 | 13..328 | 1580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:31:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5363875..5364016 | 328..187 | 710 | 100 | Minus |
3L | 28110227 | 3L | 5364082..5364209 | 189..62 | 640 | 100 | Minus |
3L | 28110227 | 3L | 5364943..5364991 | 61..13 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:31:01 has no hits.
BS29616.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:36 Download gff for
BS29616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-RA | 196..507 | 17..328 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:38 Download gff for
BS29616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-RA | 196..507 | 17..328 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:35 Download gff for
BS29616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-RA | 196..507 | 17..328 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:35 Download gff for
BS29616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5363875..5364015 | 188..328 | 100 | <- | Minus |
3L | 5364084..5364209 | 62..187 | 100 | <- | Minus |
3L | 5364943..5364987 | 17..61 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:38 Download gff for
BS29616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5356975..5357115 | 188..328 | 100 | <- | Minus |
arm_3L | 5357184..5357309 | 62..187 | 100 | <- | Minus |
arm_3L | 5358043..5358087 | 17..61 | 100 | | Minus |
BS29616.pep Sequence
Translation from 16 to 327
> BS29616.pep
MTLTYWIGMIIGPPRTPFENRMYSLKIECGERYPDEPPTLRFITKVNINC
INQNNGVVDHRSVQMLARWSREYNIKTMLQEIRRIMTMKENLKLAQPPEG
SCF*
BS29616.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Uev1A-PB | 103 | CG10640-PB | 1..103 | 1..103 | 557 | 100 | Plus |
Uev1A-PC | 145 | CG10640-PC | 43..145 | 1..103 | 557 | 100 | Plus |
Uev1A-PA | 145 | CG10640-PA | 43..145 | 1..103 | 557 | 100 | Plus |
Ubc6-PC | 151 | CG2013-PC | 36..114 | 6..87 | 136 | 34.9 | Plus |
Ubc6-PA | 151 | CG2013-PA | 36..114 | 6..87 | 136 | 34.9 | Plus |