BS29632.complete Sequence
473 bp assembled on 2012-05-25
GenBank Submission: KX806254
> BS29632.complete
GAAGTTATCAGTCGACATGGCGATGATGGCAGCGCTTGCCTCGCTCTTTC
TGCTCGTCACGCTGGCCAGCTCAGCCCGTGCCATTACCTGCTACGAATGT
GATTCCGTCAATAATCCAGGGTGTGGGGAGCGATTTGTGGGCGATGACAT
ATCCACGACGGATTGCGATGTGGTGGCGAACATGCGATCCCTGGGAGCGG
AGGCCACTTGCCTTACCAAGTACCATGAGGGAATGCCAGGAGACACGCGC
TTCGTGAGGCGCTCCTGTTACTTTGGCGATGCCTCCCCAATAGGCGTCAG
TTGCGACGATGGACCAGATCCTGTGGTGCCCTTTATGAACTTCCTCGGCT
GCACACTGTGCGATACGGATTTGTGCAACGCAGCCGCTGGATTATCCACA
CTACCCTTGGTCATTGCCCTTTCGATACTCGGACTGCTTGTCCTACTGGC
GACCTAAAAGCTTTCTAGACCAT
BS29632.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:31:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14401-RA | 441 | CG14401-PA | 1..441 | 17..457 | 2205 | 100 | Plus |
| CG14401-RC | 453 | CG14401-PC | 1..453 | 17..457 | 2050 | 97.4 | Plus |
| CG14401-RB | 597 | CG14401-PB | 215..597 | 75..457 | 1915 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:31:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14401-RA | 1231 | CG14401-RA | 281..721 | 17..457 | 2205 | 100 | Plus |
| CG14401-RC | 1150 | CG14401-RC | 281..733 | 17..457 | 2050 | 97.4 | Plus |
| CG14401-RB | 1294 | CG14401-RB | 495..877 | 75..457 | 1915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:31:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20870832..20871055 | 234..457 | 1120 | 100 | Plus |
| 2L | 23513712 | 2L | 20870598..20870760 | 71..233 | 815 | 100 | Plus |
| 2L | 23513712 | 2L | 20870134..20870191 | 17..74 | 290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:31:05 has no hits.
BS29632.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:37 Download gff for
BS29632.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14401-RA | 287..725 | 17..455 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:41 Download gff for
BS29632.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14401-RA | 281..719 | 17..455 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:36 Download gff for
BS29632.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14401-RA | 281..719 | 17..455 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:36 Download gff for
BS29632.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20870134..20870191 | 17..74 | 100 | -> | Plus |
| 2L | 20870602..20870760 | 75..233 | 100 | -> | Plus |
| 2L | 20870832..20871053 | 234..455 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:41 Download gff for
BS29632.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20870134..20870191 | 17..74 | 100 | -> | Plus |
| arm_2L | 20870602..20870760 | 75..233 | 100 | -> | Plus |
| arm_2L | 20870832..20871053 | 234..455 | 100 | | Plus |
BS29632.pep Sequence
Translation from 16 to 456
> BS29632.pep
MAMMAALASLFLLVTLASSARAITCYECDSVNNPGCGERFVGDDISTTDC
DVVANMRSLGAEATCLTKYHEGMPGDTRFVRRSCYFGDASPIGVSCDDGP
DPVVPFMNFLGCTLCDTDLCNAAAGLSTLPLVIALSILGLLVLLAT*
BS29632.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14401-PA | 146 | CG14401-PA | 1..146 | 1..146 | 766 | 100 | Plus |
| CG14401-PC | 150 | CG14401-PC | 1..150 | 1..146 | 751 | 97.3 | Plus |
| CG14401-PB | 198 | CG14401-PB | 1..198 | 1..146 | 699 | 73.2 | Plus |
| CG9336-PA | 148 | CG9336-PA | 4..148 | 2..145 | 214 | 36 | Plus |
| CG9338-PB | 147 | CG9338-PB | 8..147 | 7..145 | 187 | 35.4 | Plus |
