BS29657.complete Sequence
929 bp assembled on 2012-05-25
GenBank Submission: KX804594
> BS29657.complete
GAAGTTATCAGTCGACATGAAGGAGGCCAACTTGGAGGATCAGTATGCCA
GTTTTCCGGAGATCAGGCGACCGGAGGTGCTGAAATTTCTGGACTGGATC
CACGCGCAGCCGCACATCTCGGATAGGTTTTCCGAGGGCGAGGCACTGCA
CTTCTTTCACGCCTGCCGCTACAGCATGGAGGTGGCCAAGCAGGTCCTGG
ACACCAATCTCACGGCCCGCACCCACCTGGAGGAGTTCTTCGTGAACCTC
GATTGCGAGCGGCCCGAGATCAGGCGCGCCATGCGAACAGTCTCTATTGT
TCCCCTGCCAGGAGCCACTCCCGAAGGATACCGGGTGATTCTCGCCAAGC
TTGATGACCTGAATACCTCAAATTATAATTTTGCAGATGTCATGAAGCTC
TATTGCATGGTGTTTGACTTTTGGATGTATGAAGATGGCATTCAGCCGGG
ACACGTTATTGTAATCGATCTGAAAAACACTTCCTTGGGGCATGTAGCCC
GCATTGGACTCTTGCAAATGAAGAAGTTCCTTTACTACCTGCAGGAAGCG
GCTGCCATCCGGTTGATAGGCTTTCACTTCATCAACATTGTACCGTTCAT
GGACAAGATTCTTGCGCTGATGACTCCGTTTATGAAAAAGGAACTGACCA
CTGTGCTCCATATGCACAGTGACCTAAAGGAATTCTACAAGTTTGTGCCC
CAGGAAATGCTTCCCAAGGAATATGGTGGTCAACTGGAGGAGGCAAACGT
GGCGAAAGAGATTTACTATAAGAAGTTGCTGGACAATCGAAAGGAAATGA
TCGAGTTTGAGACTCGCCACCAGGTGAACGAGAAATTGCGACCCGGCAAG
GCCAAGAATGCATCCGACTTATTCGGGATTGAGGGAAACTTCAAGAAGTT
GGATATCGATTAGAAGCTTTCTAGACCAT
BS29657.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:31:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11550-RA | 897 | CG11550-PA | 1..897 | 17..913 | 4485 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:31:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11550-RA | 1060 | CG11550-RA | 84..980 | 17..913 | 4485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:31:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31679523..31679797 | 291..17 | 1375 | 100 | Minus |
| 3R | 32079331 | 3R | 31678431..31678647 | 758..542 | 1085 | 100 | Minus |
| 3R | 32079331 | 3R | 31678227..31678383 | 913..757 | 785 | 100 | Minus |
| 3R | 32079331 | 3R | 31678700..31678845 | 545..400 | 730 | 100 | Minus |
| 3R | 32079331 | 3R | 31679333..31679440 | 399..292 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:31:09 has no hits.
BS29657.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:37 Download gff for
BS29657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11550-RA | 84..980 | 17..913 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:43 Download gff for
BS29657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11550-RA | 84..980 | 17..913 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:37 Download gff for
BS29657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11550-RA | 84..980 | 17..913 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:37 Download gff for
BS29657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31678227..31678381 | 759..913 | 100 | <- | Minus |
| 3R | 31678431..31678644 | 545..758 | 100 | <- | Minus |
| 3R | 31678701..31678845 | 400..544 | 100 | <- | Minus |
| 3R | 31679333..31679440 | 292..399 | 100 | <- | Minus |
| 3R | 31679523..31679797 | 17..291 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:43 Download gff for
BS29657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27503949..27504103 | 759..913 | 100 | <- | Minus |
| arm_3R | 27504153..27504366 | 545..758 | 100 | <- | Minus |
| arm_3R | 27504423..27504567 | 400..544 | 100 | <- | Minus |
| arm_3R | 27505055..27505162 | 292..399 | 100 | <- | Minus |
| arm_3R | 27505245..27505519 | 17..291 | 100 | | Minus |
BS29657.pep Sequence
Translation from 16 to 912
> BS29657.pep
MKEANLEDQYASFPEIRRPEVLKFLDWIHAQPHISDRFSEGEALHFFHAC
RYSMEVAKQVLDTNLTARTHLEEFFVNLDCERPEIRRAMRTVSIVPLPGA
TPEGYRVILAKLDDLNTSNYNFADVMKLYCMVFDFWMYEDGIQPGHVIVI
DLKNTSLGHVARIGLLQMKKFLYYLQEAAAIRLIGFHFINIVPFMDKILA
LMTPFMKKELTTVLHMHSDLKEFYKFVPQEMLPKEYGGQLEEANVAKEIY
YKKLLDNRKEMIEFETRHQVNEKLRPGKAKNASDLFGIEGNFKKLDID*
BS29657.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11550-PA | 298 | CG11550-PA | 1..298 | 1..298 | 1563 | 100 | Plus |
| CG2663-PC | 308 | CG2663-PC | 17..308 | 15..298 | 441 | 32.4 | Plus |
| CG2663-PA | 308 | CG2663-PA | 17..308 | 15..298 | 441 | 32.4 | Plus |
| CG12926-PA | 313 | CG12926-PA | 22..313 | 8..298 | 349 | 29.9 | Plus |
| CG3823-PA | 295 | CG3823-PA | 22..295 | 26..298 | 340 | 26.7 | Plus |
