BS29701.complete Sequence
866 bp assembled on 2012-07-26
GenBank Submission: KX804398
> BS29701.complete
GAAGTTATCAGTCGACATGTCGAAGTTGAGCGACACTAAGATCCCGATCA
CGGAGTTCCTGGAGGCATACCGTCGCCAGCCGTGCCTCTACAACACACTG
CTGGACTCGTACAAGAATCGTGTGTCCCGGGAGGAGGCCTACGGAGCGAT
CATCCGGTCCCTGAAGATACCCCAACTGACAGTGTCGGACATAAAGCTAA
AGATCAAGAGCGTGCGTACCGTGTACTCTAAGGAGCTGCGCATCTGGATG
CGTGAGAAGGAGCTGGGCAGGACCTACGAACCAAAGTTGTTTTGGTTTAG
GTTGGCCGACTCCTTTCTACGCTCCGTTTCCCTCTCCCACTGCAAAAGGC
AGGGAAAAAATAACAGTTCCAGTGCTCAATTAACGACGATCAAATCGGAT
GAGACGAGCAAGCTTCTTTGCACTGCCGCCGCAGATATCACTATGAGCGA
GGATGCGCTAGAGGAAGAGGATGCAGAGGTAAATGGCGAGCCGGAGGAGT
GTCCTTTGGAGGAAAGCAGGCCAACAGCAAGCATCTGCAAAGATGATTCC
ACGCTCTGCCTGGCGGATCAACCACAGCAGGAGCACTATTCTCAGGGGTG
CAGCAGCTCCCAGCAGCTTCCTCACACGATGGCACAACGAAAATCAAAGT
ACATTACAAGTCTGGACTCGGCCGGAGAGGATGATCTTATTATATTCGGC
CAGAGCATCGCCTCTCAGCTGCGAACCATTCCGGATTCATATTCTCGGTC
CGTGGCTAAGCTGCGTATCCAGCAGGTGCTGTTCGAGGCTGAAACCGGGC
AGTTTCAGAGCACCGAGGTCAATAGCACGCAACTCCAGAATACCTTTTAA
AAGCTTTCTAGACCAT
BS29701.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:46:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15601-RA | 834 | CG15601-PA | 1..834 | 17..850 | 4170 | 100 | Plus |
| CG15601-RB | 831 | CG15601-PB | 1..831 | 17..850 | 4090 | 99.6 | Plus |
| CG15601-RC | 696 | CG15601-PC | 189..696 | 343..850 | 2510 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:46:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15601-RA | 1078 | CG15601-RA | 67..902 | 16..851 | 4180 | 100 | Plus |
| CG15601-RB | 1485 | CG15601-RB | 477..1309 | 16..851 | 4100 | 99.6 | Plus |
| CG15601-RC | 940 | CG15601-RC | 256..764 | 343..851 | 2515 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:46:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15711508..15712010 | 349..851 | 2515 | 100 | Plus |
| X | 23542271 | X | 15711123..15711456 | 16..349 | 1670 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 11:46:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 138..196 | 341..404 | 109 | 70.3 | Plus |
BS29701.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 14:34:14 Download gff for
BS29701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15601-RA | 30..861 | 17..848 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:57 Download gff for
BS29701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15601-RA | 68..899 | 17..848 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:53 Download gff for
BS29701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15601-RA | 68..899 | 17..848 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:53 Download gff for
BS29701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15711124..15711456 | 17..349 | 100 | -> | Plus |
| X | 15711509..15712007 | 350..848 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:57 Download gff for
BS29701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15605157..15605489 | 17..349 | 100 | -> | Plus |
| arm_X | 15605542..15606040 | 350..848 | 100 | | Plus |
BS29701.pep Sequence
Translation from 16 to 849
> BS29701.pep
MSKLSDTKIPITEFLEAYRRQPCLYNTLLDSYKNRVSREEAYGAIIRSLK
IPQLTVSDIKLKIKSVRTVYSKELRIWMREKELGRTYEPKLFWFRLADSF
LRSVSLSHCKRQGKNNSSSAQLTTIKSDETSKLLCTAAADITMSEDALEE
EDAEVNGEPEECPLEESRPTASICKDDSTLCLADQPQQEHYSQGCSSSQQ
LPHTMAQRKSKYITSLDSAGEDDLIIFGQSIASQLRTIPDSYSRSVAKLR
IQQVLFEAETGQFQSTEVNSTQLQNTF*
BS29701.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15601-PA | 277 | CG15601-PA | 1..277 | 1..277 | 1404 | 100 | Plus |
| CG15601-PB | 276 | CG15601-PB | 1..276 | 1..277 | 1387 | 99.6 | Plus |
| CG15601-PC | 231 | CG15601-PC | 1..231 | 1..277 | 1103 | 83.4 | Plus |
| CG15601-PD | 230 | CG15601-PD | 1..230 | 1..277 | 1097 | 83 | Plus |
