BS29702.complete Sequence
836 bp assembled on 2012-05-25
GenBank Submission: KX801930
> BS29702.complete
GAAGTTATCAGTCGACATGTCGCTTGCACGTTTCCTATTTTATATTCTCG
TGTTCAGTTCACTCTACTGTGACTTATTGGCATTGGAGCACTTCATTGTG
GGTGGCCAGAATGCAGCTGAAGGAGATGCCCCCTACCAGGTGTCGCTCCA
AACTCTTTTGGGTAGTCACCTATGCGGTGGTGCCATCATATCGGACCGAT
GGATAATTACGGCTGGTCACTGTGTCAAAGGATACCCGACTAGCAGACTT
CAAGTGGCCACTGGTACAATTCGCTATGCGGAACCAGGAGCTGTTTATTA
CCCAGACGCCATCTACCTGCACTGCAACTATGACAGTCCCAAGTACCAGA
ATGATATTGGCCTGCTCCACCTGAACGAGAGCATTACCTTTAACGCACTA
ACTCAGGCGGTTGAACTACCCACATCCCCTTTTCCAAGAGGAGCTTCGGA
GCTGGTTTTCACCGGATGGGGATCTCAGTCAGCGGCGGGGTCGTTGCCAT
CGCAGTTGCAGCGTGTCCAGCAGCAACACCTCAACTCCCCGGCTTGCGAG
TCCATGATGTCTGCCTACGAGGATCTGGAACTGGGACCTTGCCATATTTG
TGCTTATCGTCAGGCAAATATTGGAGCCTGCCACGGAGATTCTGGAGGTC
CTCTAGTTCACCAGGGCACCCTGGTGGGCATACTCAACTTCTTTGTACCC
TGCGCCCAGGGTGTGCCTGATATATTCATGAATATAATGTACTACCGCGA
CTGGATGCGACAAACGATGAGTGGCAATGGCAAATGTGCACAGGTCAACC
AGCAGACAATAGATGGATAAAAGCTTTCTAGACCAT
BS29702.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:31:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17477-RA | 804 | CG17477-PA | 1..804 | 17..820 | 4020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:31:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17477-RA | 851 | CG17477-RA | 8..814 | 16..822 | 4035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:31:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17126125..17126931 | 822..16 | 4035 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:31:30 has no hits.
BS29702.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:41:38 Download gff for
BS29702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17477-RA | 9..810 | 17..818 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:54 Download gff for
BS29702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17477-RA | 9..810 | 17..818 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:46 Download gff for
BS29702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17477-RA | 9..810 | 17..818 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:46 Download gff for
BS29702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17126129..17126930 | 17..818 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:54 Download gff for
BS29702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12951851..12952652 | 17..818 | 100 | | Minus |
BS29702.pep Sequence
Translation from 16 to 819
> BS29702.pep
MSLARFLFYILVFSSLYCDLLALEHFIVGGQNAAEGDAPYQVSLQTLLGS
HLCGGAIISDRWIITAGHCVKGYPTSRLQVATGTIRYAEPGAVYYPDAIY
LHCNYDSPKYQNDIGLLHLNESITFNALTQAVELPTSPFPRGASELVFTG
WGSQSAAGSLPSQLQRVQQQHLNSPACESMMSAYEDLELGPCHICAYRQA
NIGACHGDSGGPLVHQGTLVGILNFFVPCAQGVPDIFMNIMYYRDWMRQT
MSGNGKCAQVNQQTIDG*
BS29702.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17477-PA | 267 | CG17477-PA | 1..267 | 1..267 | 1434 | 100 | Plus |
| CG17475-PB | 288 | CG17475-PB | 50..273 | 27..253 | 602 | 47.1 | Plus |
| CG17475-PA | 288 | CG17475-PA | 50..273 | 27..253 | 602 | 47.1 | Plus |
| CG31265-PA | 266 | CG31265-PA | 37..264 | 27..257 | 598 | 49.4 | Plus |
| CG31269-PB | 273 | CG31269-PB | 38..265 | 27..257 | 590 | 48.1 | Plus |
