BS29706.complete Sequence
647 bp assembled on 2012-05-24
GenBank Submission: KX803950
> BS29706.complete
GAAGTTATCAGTCGACATGACTTCTCCGAGATTGTTTGTTCTCGAAGATC
TGTTCAAGTTTAACAATATTGTGATGGATCCCTTGGCGGAAGTGTACTCC
TTGCCATTCTTGCTTCCCAAGATTCTGGAGCATCCCGAACTGGTTCTTGC
CGCCGATGCTCCTGACAATAGTCTCATGGGCTTCATTCTGGGGACACGCG
TCGAGGATGCGACTGAATCTTTTGGAGATGCAAAGACTATGACCTGGAAT
CATGGACACATCTCTGCTCTGGCCGTAGCTCAGGATTATCGTAAACTGGG
CTTGGGCACTCGGCTCTTAACAACCGTTAGGGATATGATGGATCGTCAGA
AAGACTTTTATATAGATCTATTTGTGCGAGAGAAGAATACAATTGCCATT
GGGCTTTACGAGTCCTTGGGATATGTGAAATATCGCTGGATACCTAAGTT
TTATGCCGACGACCATGGATACGAAATGAGACTACCTTTGTCCAGCGATG
TGGATAGGAAATCCTTAGAGGGAATAATAATCAAGAAAATCTACAGCTTT
GGCAATAAGTTGTACTATCTGCTGATGTTTTACATATTCGGAATTATAGC
TATAGTTATTGGTGGAATATTGGTTGAATAAAAGCTTTCTAGACCAT
BS29706.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:22:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31851-RB | 615 | CG31851-PB | 1..615 | 17..631 | 3075 | 100 | Plus |
| CG31851-RA | 615 | CG31851-PA | 1..615 | 17..631 | 3075 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:22:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31851-RB | 1168 | CG31851-RB | 203..818 | 16..631 | 3080 | 100 | Plus |
| CG31851-RA | 860 | CG31851-RA | 203..818 | 16..631 | 3080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:22:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13257679..13258294 | 16..631 | 3080 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:22:29 has no hits.
BS29706.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:03 Download gff for
BS29706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31851-RA | 204..816 | 17..629 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:11 Download gff for
BS29706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31851-RA | 204..816 | 17..629 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:34 Download gff for
BS29706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31851-RA | 204..816 | 17..629 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:34 Download gff for
BS29706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13257680..13258292 | 17..629 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:11 Download gff for
BS29706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13257680..13258292 | 17..629 | 100 | | Plus |
BS29706.pep Sequence
Translation from 16 to 630
> BS29706.pep
MTSPRLFVLEDLFKFNNIVMDPLAEVYSLPFLLPKILEHPELVLAADAPD
NSLMGFILGTRVEDATESFGDAKTMTWNHGHISALAVAQDYRKLGLGTRL
LTTVRDMMDRQKDFYIDLFVREKNTIAIGLYESLGYVKYRWIPKFYADDH
GYEMRLPLSSDVDRKSLEGIIIKKIYSFGNKLYYLLMFYIFGIIAIVIGG
ILVE*
BS29706.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31851-PB | 204 | CG31851-PB | 1..204 | 1..204 | 1052 | 100 | Plus |
| CG31851-PA | 204 | CG31851-PA | 1..204 | 1..204 | 1052 | 100 | Plus |
| NAA20-PD | 175 | CG14222-PD | 1..160 | 1..167 | 343 | 40 | Plus |
| NAA20-PC | 175 | CG14222-PC | 1..160 | 1..167 | 343 | 40 | Plus |
| NAA20-PA | 175 | CG14222-PA | 1..160 | 1..167 | 343 | 40 | Plus |
