Clone BS29710 Report

Search the DGRC for BS29710

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:297
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG32987-RA
Protein status:BS29710.pep: full length peptide match
Sequenced Size:806

Clone Sequence Records

BS29710.complete Sequence

806 bp assembled on 2012-05-24

GenBank Submission: KX804195

> BS29710.complete
GAAGTTATCAGTCGACATGGACAACATTTACCACCAGGACAACATCCGGC
CGACGATCGAGCAGCTGGACCCAATGACCCAGTTCATCCGCAGCATCTAT
AACATTGGCCTGATCCTTATCGGAATTACGGTGGGCGCATGGATTCTGCT
CATGCTGACCCATATTCACCTGCAGAGGTACCTTCCGTTTCCCTGCTACG
TCCTGGCTCTAATAATTTTTCTGGTGATGATATGCATGCATTGTATCCCG
AGAATATCCTACTACTCTCCCTGTAAGTGGTTCATGACAGGTCTGGTGGT
TGTGTGTACCACCTTGTTTGGCTGCCATTTCATCCACGACTTGAGCCCGC
TCATTATCAGTTTCGTGATGATCGGCGTGGCCCTGATCATTATGTTACTC
AACTTCTCTGGGGCCATGTGCCCGCAGGAGTTCCTGCCCGGCGGTGTTTG
CTCCACGCTGCTGATGATGGCACTGCTGTTGGTCTTGACCATTGTGGGAA
TCGTCCAGCTCTGCACCGGGAGTGTTGAGCTGCTCGACACCTTCGTCAGC
ATTCTGTTCCTGATGCTGATCATAGCGATCCCCATTCAGGCGCAGTTCAA
CCATGGCCGTCTGAACGTCGTGGAAGTGGTTCCCGAAGAGCACCTCATGG
TCTGCACCCTGACTTTATACTTGCATTCAATGATGTTCTTCTTCTGCGTG
TGCTACTTCATCCTGGTCGACGAGAGAAAGGAGGCCATCAGACAAACATC
TGAAGCTCCGAAAATTTCACTCGAAAATGATTTTGATTGAAAGCTTTCTA
GACCAT

BS29710.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:22:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG32987-RA 774 CG32987-PA 1..774 17..790 3870 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:22:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG32987-RA 1037 CG32987-RA 45..818 17..790 3870 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:22:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8863855..8864628 17..790 3870 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:22:20 has no hits.

BS29710.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:02 Download gff for BS29710.complete
Subject Subject Range Query Range Percent Splice Strand
CG32987-RA 45..817 17..789 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:06 Download gff for BS29710.complete
Subject Subject Range Query Range Percent Splice Strand
CG32987-RA 45..817 17..789 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:30 Download gff for BS29710.complete
Subject Subject Range Query Range Percent Splice Strand
CG32987-RA 45..817 17..789 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:30 Download gff for BS29710.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8863855..8864627 17..789 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:06 Download gff for BS29710.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8863855..8864627 17..789 100   Plus

BS29710.pep Sequence

Translation from 16 to 789

> BS29710.pep
MDNIYHQDNIRPTIEQLDPMTQFIRSIYNIGLILIGITVGAWILLMLTHI
HLQRYLPFPCYVLALIIFLVMICMHCIPRISYYSPCKWFMTGLVVVCTTL
FGCHFIHDLSPLIISFVMIGVALIIMLLNFSGAMCPQEFLPGGVCSTLLM
MALLLVLTIVGIVQLCTGSVELLDTFVSILFLMLIIAIPIQAQFNHGRLN
VVEVVPEEHLMVCTLTLYLHSMMFFFCVCYFILVDERKEAIRQTSEAPKI
SLENDFD*

BS29710.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG32987-PA 257 CG32987-PA 1..257 1..257 1344 100 Plus
CG32983-PA 250 CG32983-PA 22..226 23..231 257 28.9 Plus
CG32988-PA 255 CG32988-PA 41..248 23..233 204 22.3 Plus