BS29711.complete Sequence
830 bp assembled on 2012-05-24
GenBank Submission: KX803600
> BS29711.complete
GAAGTTATCAAAGGACATGGAATCAGGTTGGACACTCGTTCGGCTGCTGT
TAATTCTAAATTCCGTGAGAACAGAAGCTGGGAATAGAGAGGAGTGGACT
GGCAGGTTCCATCCCAGGATTTATAATGGCATAAAGACGACTGTCGAATC
TCTTGGAGGAGTGGGCATTCAGCTCTTCAATGGGAGAAAGCTCGTCTGCT
CCGCAACACTTCTAACACCGCGACACATCCTTACGGCAGCCCATTGTTTC
GAAAACCTGAATAGGTCTAAGTTCCACGTGATCGGTGGAAAGTCAGCGGA
ATTCACTTGGCACGGCAACAACTTCAACAAGAATAAACTTATAAGGGTGC
AAATTCATCCGAAATATGCGAAAATGAAATTCATCGCGGATGTCGCGGTG
GCGAAGACCAAGTATCCCTTGAGGAGCAAGTACATCGGCTACGCCCAGCT
CTGTCGATCGGTACTGCATCCAAGGGATAAACTCATTGCAGCCGGTTGGG
GATTCGAAGGCGGCGTTTGGGATGAGTCCAGGAAGAAAACATTTCGCTCG
ATGAAAGTTGGTATTGTGAGTAAACGAGATTGCGAGAAGCAGCTGGATCG
CAAGATGCCACCCAATATCATCTGTGCCGGTGCCTACAACAACAAGACTC
TCTGCTTCGGCGACTCCGGTGGACCACTTCTGTTGGGGCGGCAAGTTTGT
GGCATCAACACGTGGACTTTCAAATGCGGCAACAACGAAAAGCCAGACGT
ATACATGGGTGTGCGATACTACGCCAAGTTTATTAAAAGAACTATTAACA
GAATGGGCTTTTGAAAGCTTTCTAGACCAT
BS29711.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:22:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4815-RA | 798 | CG4815-PA | 1..798 | 17..814 | 3990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:22:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4815-RA | 1053 | CG4815-RA | 180..987 | 8..815 | 4010 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:22:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27989765..27990572 | 815..8 | 4010 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:22:24 has no hits.
BS29711.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:03 Download gff for
BS29711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4815-RA | 189..985 | 17..813 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:08 Download gff for
BS29711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4815-RA | 189..985 | 17..813 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:32 Download gff for
BS29711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4815-RA | 189..985 | 17..813 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:32 Download gff for
BS29711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27989767..27990563 | 17..813 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:08 Download gff for
BS29711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23815489..23816285 | 17..813 | 100 | | Minus |
BS29711.pep Sequence
Translation from 16 to 813
> BS29711.pep
MESGWTLVRLLLILNSVRTEAGNREEWTGRFHPRIYNGIKTTVESLGGVG
IQLFNGRKLVCSATLLTPRHILTAAHCFENLNRSKFHVIGGKSAEFTWHG
NNFNKNKLIRVQIHPKYAKMKFIADVAVAKTKYPLRSKYIGYAQLCRSVL
HPRDKLIAAGWGFEGGVWDESRKKTFRSMKVGIVSKRDCEKQLDRKMPPN
IICAGAYNNKTLCFGDSGGPLLLGRQVCGINTWTFKCGNNEKPDVYMGVR
YYAKFIKRTINRMGF*
BS29711.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4815-PA | 265 | CG4815-PA | 1..265 | 1..265 | 1431 | 100 | Plus |
| CG11037-PA | 292 | CG11037-PA | 61..288 | 34..263 | 282 | 31.5 | Plus |
| Sems-PA | 275 | CG10586-PA | 40..270 | 31..263 | 262 | 29.4 | Plus |
| CG10587-PA | 276 | CG10587-PA | 42..269 | 31..260 | 258 | 30.9 | Plus |
| CG3650-PA | 249 | CG3650-PA | 19..249 | 28..262 | 253 | 27.4 | Plus |
