BS29715.complete Sequence
1070 bp assembled on 2012-05-24
GenBank Submission: KX800226
> BS29715.complete
GAAGTTATCAGTCGACATGGAATTGATTGAAACAGCTTCGACTCCTGGAG
ATTCCGAAACTGAAATCGCCATCCCGGAGGCCGCTTTCGATTCCTTTAAG
ATGCCTATGCTACCAAGTCAGTTCCATTTGGAGAACTCCATGTCTCCGGG
CTACGCCATTAAGCACTCGCTCCTCGGTCACAGTGGTTGCGTTACTGGTC
TAAAGTTTAGTTCGAATGGCGAGAACTTGGTCAGCAGCTCCGGCGATAGG
CTGCTTAAGCTCTGGGACTTGAGCGCAACCCGATGCATTCAATCGCTGGC
CGGGCACGGAGACGGAGTCAACGATGTCGCCTGGTCGGCGGCTGGATTAA
TTGCCAGTTGTAGCGATGACATGACCGTGCGTCTCTGGGATGCCCGCAGC
AAGCTCTGCGTCAAAGTTTTGGAGGGGCATTCCAGGTACAGTTTCTCCTG
CTGCTTTAATCCGCAGGCCAATCTGCTGGCCTCCACTAGCTTTGACGAAA
CAGTGCGCCTTTGGGATGTCCGCACTGGCAAAACGCTCAAAATCGTCCAC
GCCCACCAGGATCCCATAACATCGGTGGACTTCCACCGCGATGGCAATAT
TTTTGTCACCAGCAGCTATGATGGGCTGGTCCGCTTGTGGGACTCTAGCA
CCGGGCATGTGCTGAAGACTCTCGTTGACGTTGACAACATCCCGGTCGGA
TATGTGAAGTTCTCACCGAACGGACGCTACATCCTGTCGTCCACATTGAA
CAACACCCTTAGGCTATGGAACTACAAGAAGCCCAAGTGCATGAGGACCT
ATCGCGGGCATTTGAATGAGTTCTATTGCTCCAACTCCAATTTTTCCACC
ACCGGCGGCATTTGGATTGTCTCCGGCAGCGAGGATAATACGCTTTGCAT
CTGGAATCTGCAGACGAGGGAGCTGGTGCAAAAGATAAGCACGGAGGGCG
ACCAGATTTTGAGCACACATTGCCATCCCACGGCAAATGTGATTGCTAGC
GGCGCCCTACAAAATTCATATGCCATTAAAATCTGGAAGAGCAGCGAGAA
GTAGAAGCTTTCTAGACCAT
BS29715.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:22:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10931-RA | 1038 | CG10931-PA | 1..1038 | 17..1054 | 5190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:22:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10931-RA | 1202 | CG10931-RA | 84..1121 | 17..1054 | 5190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:22:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17749018..17750055 | 17..1054 | 5190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:22:38 has no hits.
BS29715.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:05 Download gff for
BS29715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10931-RA | 84..1121 | 17..1054 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:16 Download gff for
BS29715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10931-RA | 84..1121 | 17..1054 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:36 Download gff for
BS29715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10931-RA | 84..1121 | 17..1054 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:36 Download gff for
BS29715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17749018..17750055 | 17..1054 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:16 Download gff for
BS29715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13636523..13637560 | 17..1054 | 100 | | Plus |
BS29715.pep Sequence
Translation from 16 to 1053
> BS29715.pep
MELIETASTPGDSETEIAIPEAAFDSFKMPMLPSQFHLENSMSPGYAIKH
SLLGHSGCVTGLKFSSNGENLVSSSGDRLLKLWDLSATRCIQSLAGHGDG
VNDVAWSAAGLIASCSDDMTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQ
ANLLASTSFDETVRLWDVRTGKTLKIVHAHQDPITSVDFHRDGNIFVTSS
YDGLVRLWDSSTGHVLKTLVDVDNIPVGYVKFSPNGRYILSSTLNNTLRL
WNYKKPKCMRTYRGHLNEFYCSNSNFSTTGGIWIVSGSEDNTLCIWNLQT
RELVQKISTEGDQILSTHCHPTANVIASGALQNSYAIKIWKSSEK*
BS29715.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10931-PA | 345 | CG10931-PA | 1..345 | 1..345 | 1834 | 100 | Plus |
| wds-PB | 361 | CG17437-PB | 57..359 | 41..342 | 937 | 55.4 | Plus |
| wds-PA | 361 | CG17437-PA | 57..359 | 41..342 | 937 | 55.4 | Plus |
| Lis-1-PG | 411 | CG8440-PG | 86..409 | 39..341 | 372 | 28.8 | Plus |
| Lis-1-PF | 411 | CG8440-PF | 86..409 | 39..341 | 372 | 28.8 | Plus |
| Lis-1-PG | 411 | CG8440-PG | 309..411 | 68..169 | 197 | 36.9 | Plus |
