BS29718.complete Sequence
1043 bp assembled on 2012-05-24
GenBank Submission: KX806540
> BS29718.complete
GAAGTTATCAGTCGACATGCGCGAGATCGAAGGTGCAAATGCCAGTGTCA
GCACCTCGAAACAAAGCGAACGCAAAGTGAATCCTCTGGGCAAACTAAAC
AAACGCTTCTTAGGCCGCACCATAAACACCGCGATTCGGCATAATGATAG
AGAAAAGGAGCGCACACAGGCAAATTGCCGACAGAAGCTGCAGGATCTGG
ATGATGTGCACGAAAGGAGGAAGTCCAACTACTTTTACAGCCGCGATGCA
CCCAGAACTCAAAGTGTTGATAGAAGCAGAAGTTCCAGCAGAAGGCGCAG
CAGGAGCCGCCACAAAAAGGCCAAGAAGCATCGCAGCCGAAGAAGAACTA
GGAGCAGCAGAAGTTCAAGCCGCAGTCGAAGTCGCAGCAGTTCACATCGG
CGAAAAAAGCGCAAAAAGAAGGTTAAAAAACACAAAAAATCACACAGAAG
ACGAAGAAGCAGCCAGAGCAGCAGCGGTTGCGATTGGGAATCCGCACCCA
GCGAGTCGTTACGTATACCCCCGCCTTCAGATGTGTTCCTAAACCACTCC
AAGCAAATGGCTCTTGCAGTGGCCATGGCCTATGGTCAATTACTAAACCC
GAGCAGCCAAAAGAAAGCCAGCGAGTCTAAGGAACACTCCTCCTCTCCTA
TAAGCGATATATTCCGGGAACTTATGTCCGACGAAGAGGTGGACAAATCC
GAGAAGCCCGAGGCCCTGTCCATTTCATCCAGCGACGAAGAGCCAAATGT
TCTCACCATTAAAGTAAGCTCGAGCTCCGAGTCCAGCGGCAATAAATCAA
GCTCGGACTCAGATTCAGAAGCAAAGAACAGCGTACGCAGCTGTATAACC
CTAGAATCTGGTGATAATAGTGATATTGAGATAATTGAGTACCATGAAGA
GCCCAAAAAAAAGGCATGTGAAACTGAACCTGCGTCTGAACCTGAATATC
CGTCTCAATCGGATAGCACAAATCAACAAGTGGACGATAGCACAGCTGTC
ACTACAGTGGACCTGACCGAGGATTAAAAGCTTTCTAGACCAT
BS29718.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:22:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14074-RB | 1011 | CG14074-PB | 1..1011 | 17..1027 | 5055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:22:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14074-RB | 1149 | CG14074-RB | 57..1067 | 17..1027 | 5055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:22:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18866339..18867349 | 17..1027 | 5055 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 11:22:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1063..1155 | 333..422 | 132 | 66 | Plus |
BS29718.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:06 Download gff for
BS29718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14074-RA | 115..1123 | 17..1025 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:21 Download gff for
BS29718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14074-RB | 57..1065 | 17..1025 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:40 Download gff for
BS29718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14074-RB | 57..1065 | 17..1025 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:40 Download gff for
BS29718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18866339..18867347 | 17..1025 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:21 Download gff for
BS29718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18859439..18860447 | 17..1025 | 100 | | Plus |
BS29718.pep Sequence
Translation from 16 to 1026
> BS29718.pep
MREIEGANASVSTSKQSERKVNPLGKLNKRFLGRTINTAIRHNDREKERT
QANCRQKLQDLDDVHERRKSNYFYSRDAPRTQSVDRSRSSSRRRSRSRHK
KAKKHRSRRRTRSSRSSSRSRSRSSSHRRKKRKKKVKKHKKSHRRRRSSQ
SSSGCDWESAPSESLRIPPPSDVFLNHSKQMALAVAMAYGQLLNPSSQKK
ASESKEHSSSPISDIFRELMSDEEVDKSEKPEALSISSSDEEPNVLTIKV
SSSSESSGNKSSSDSDSEAKNSVRSCITLESGDNSDIEIIEYHEEPKKKA
CETEPASEPEYPSQSDSTNQQVDDSTAVTTVDLTED*
BS29718.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14074-PB | 336 | CG14074-PB | 1..336 | 1..336 | 1689 | 100 | Plus |
| Srp54-PA | 513 | CG4602-PA | 284..509 | 45..287 | 175 | 29 | Plus |
| CG6695-PA | 961 | CG6695-PA | 403..709 | 57..330 | 174 | 27.2 | Plus |
| CG5514-PC | 1109 | CG5514-PC | 592..925 | 41..336 | 166 | 24 | Plus |
| CG5514-PA | 1109 | CG5514-PA | 592..925 | 41..336 | 166 | 24 | Plus |
