BS29719.complete Sequence
983 bp assembled on 2012-05-24
GenBank Submission: KX802945
> BS29719.complete
GAAGTTATCAGTCGACATGATAAAGTGCATCTGGCTGCTGTTCTCCACAT
TATATATTCAAGATACAGGCGCTTCAGATAAATGGTGCAAAGCTGACCTG
TGCCGAGGACAACACGTGCTCTGCGATGACAATGGAAATTTTGAATCCAC
TTGTCCCAAACAAGCCGCAGCCATGGTGAAAATGAGCTGGGATATGATAG
CCCTCATCGTGGACAAGCACAATGAATATCGCAACAAGTTCGCCGGCGGA
ATGGATCAGAATCCGAAGGCGGCAAGGATGACCACGATCGAATGGGATCC
GGAACTGGCCAAAGTGGCCGACGGTCTGGTACGTCGTTGTGAGCCAATCC
GAGATCAGTGCGCCATAACCCCAAATTACGGTCATGCGGAAGTCAGCTAT
TCGCTGGAAAAGTACTTCTGCATGACCACGAAAAAGGAGGCCCTGAGGAA
GCAACTCGATCACTGGTTTGACCCCAATAGTAAAGATGAAGTGCAGAAGC
TGTTCTTCTCATGGACTAAAAATCAGCAGGAACTGTCCAAAAACTACTTT
CAGGTATTGAGGGATCGAGCTAATCGCGTGGGCTGCGCCATAGTTGAGTA
TGTTCGGCCAGCACTGGTCCACCAGTTGCTAAAGTGCGTCTACAACTGCG
GAGTGAGTCTCTGTGAGGAGGAGGATAATCCCGTCTACGAGGACACCGAC
GAAGAAGCCGCTTCAGAGTGCATGAAGGGAAGCAATAAGCAATACAAGAA
TCTTTGCCACAAAGATGAGCTCGTGAAGACCTGCAATGGTGGCTCACTTT
TCGTCGAACCTGAAAATGATTATAACGATGGTCAAGAAGAGAATATGGAA
AACGATTATGAATTCGAGACCACCGTGTTCACACTTCCAACGTACGATCC
AAACGATGTGTTGCCAACGCTACCAGACAACCCAGATTTAAATTTCAATA
CAATAGTTAAGGACTAGAAGCTTTCTAGACCAT
BS29719.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:22:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10651-RB | 951 | CG10651-PB | 1..951 | 17..967 | 4755 | 100 | Plus |
| CG10651-RA | 951 | CG10651-PA | 1..951 | 17..967 | 4755 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:22:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10651-RB | 1061 | CG10651-RB | 22..973 | 16..967 | 4760 | 100 | Plus |
| CG10651-RA | 1011 | CG10651-RA | 22..973 | 16..967 | 4760 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:22:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20133843..20134281 | 967..529 | 2195 | 100 | Minus |
| 2L | 23513712 | 2L | 20134331..20134723 | 529..137 | 1965 | 100 | Minus |
| 2L | 23513712 | 2L | 20134782..20134902 | 136..16 | 605 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:22:51 has no hits.
BS29719.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:07 Download gff for
BS29719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10651-RA | 23..973 | 17..967 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:23 Download gff for
BS29719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10651-RA | 23..973 | 17..967 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:41 Download gff for
BS29719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10651-RA | 23..973 | 17..967 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:41 Download gff for
BS29719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20133843..20134281 | 529..967 | 100 | <- | Minus |
| 2L | 20134332..20134723 | 137..528 | 100 | <- | Minus |
| 2L | 20134782..20134901 | 17..136 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:23 Download gff for
BS29719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20134782..20134901 | 17..136 | 100 | | Minus |
| arm_2L | 20133843..20134281 | 529..967 | 100 | <- | Minus |
| arm_2L | 20134332..20134723 | 137..528 | 100 | <- | Minus |
BS29719.pep Sequence
Translation from 16 to 966
> BS29719.pep
MIKCIWLLFSTLYIQDTGASDKWCKADLCRGQHVLCDDNGNFESTCPKQA
AAMVKMSWDMIALIVDKHNEYRNKFAGGMDQNPKAARMTTIEWDPELAKV
ADGLVRRCEPIRDQCAITPNYGHAEVSYSLEKYFCMTTKKEALRKQLDHW
FDPNSKDEVQKLFFSWTKNQQELSKNYFQVLRDRANRVGCAIVEYVRPAL
VHQLLKCVYNCGVSLCEEEDNPVYEDTDEEAASECMKGSNKQYKNLCHKD
ELVKTCNGGSLFVEPENDYNDGQEENMENDYEFETTVFTLPTYDPNDVLP
TLPDNPDLNFNTIVKD*
BS29719.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10651-PB | 316 | CG10651-PB | 1..316 | 1..316 | 1736 | 100 | Plus |
| CG10651-PA | 316 | CG10651-PA | 1..316 | 1..316 | 1736 | 100 | Plus |
| CG34002-PB | 350 | CG34002-PB | 32..266 | 22..262 | 261 | 29.2 | Plus |
| CG32679-PA | 254 | CG32679-PA | 8..246 | 5..252 | 259 | 30.8 | Plus |
| scpr-B-PA | 262 | CG17210-PA | 3..249 | 2..252 | 245 | 29.2 | Plus |
