BS29722.complete Sequence
1049 bp assembled on 2012-08-30
GenBank Submission: KX806014
> BS29722.complete
GAAGTTATCAGTCGACATGCCTGCCTTTATGCACCTCCTTCGCAACTTCA
TTCCCAAGTGGTGTCTCCCACGTCCAGAGAAGCATCTCCAGAACCACATA
TTCCGTCAGCTCCAGACGAATCACCCATCCGCCGCACTGGTGGCCATCAA
AACAAGTGAACAGGTGCTGCCCAAGTGCAGATTCATGCAGTACCGGCGCG
CCAATGAGCAGGTGAAGCGATTGGGCATGGTCTCCGAGGATGGCAGCAAG
ATGGCGGAGCTATCGAGCATGACCTGCGCCGCCCCCAATATGATGGACTT
CATCCAGCAGAGATACTGCATGGTTAGCCTGCTGGACAGTGTGCAATTCA
TGAAGATCGAGGATGTGGAGGCCGTGGATCTCCGCCTGCTGCCACCCATC
GATTCCCCCAGTAAGATCATTGGCGTGGACTGCAACTATGTGGATAACTG
TGATGAGCAGCACATCTCGATTCCGAGGGAGCCGAGTTTTCACGTCAAGT
TCGCCTCCTCGATAACCGGAGCTCTGGACAACATACGGGCGCATAGTTCG
GCCAAACACATTGACTATGGCTGCCAGTTGGCCGTGGTTATGGGCAAAAG
ATGCCGTGAAGTTTCGCCCAAAGAGGCTCTGAATCACGTATTTGGATTCA
TGGTGGTCCAGGACATCGTGGCAAGGGACTGGAATGTTCCGCTGGGCGGT
CACTCAATGGATACTTTCCTCCCACTGGGACCTACAATTGTGCACAGGTG
CCATGTGCCAGACTTAAACAATCTGTGGATTAAGACAATCATCAATGGCG
AGGAGCGCCAGACGGGCAATACCCGTAATATGATATTCAAGATCGACTTC
CTTATTCACCGCCTATCCCAATATTTAACTCTCTGTCCGGGCGACATTAT
ACTAACGGGAACACCCGCCGGATCGGGTGCATTTCGTCATCCGTCGTGCT
TTTTGAAGCCCGGTGATCTTATAGAGAGCGAAATTCAAAATTTGGGCAAA
ATGTGCAATAAAGTCGTTAATTCCTATTCTTGAAAGCTTTCTAGACCAT
BS29722.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:53:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11251-RA | 1017 | CG11251-PA | 1..1017 | 17..1033 | 5085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11251-RA | 1389 | CG11251-RA | 142..1158 | 17..1033 | 5085 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13088812..13089828 | 1033..17 | 5085 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:53:05 has no hits.
BS29722.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-30 11:22:35 Download gff for
BS29722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11251-RA | 142..1157 | 17..1032 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:39 Download gff for
BS29722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11251-RA | 142..1157 | 17..1032 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:16:02 Download gff for
BS29722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11251-RA | 142..1157 | 17..1032 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:16:02 Download gff for
BS29722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13088813..13089828 | 17..1032 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:39 Download gff for
BS29722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13081913..13082928 | 17..1032 | 100 | | Minus |
BS29722.pep Sequence
Translation from 16 to 1032
> BS29722.pep
MPAFMHLLRNFIPKWCLPRPEKHLQNHIFRQLQTNHPSAALVAIKTSEQV
LPKCRFMQYRRANEQVKRLGMVSEDGSKMAELSSMTCAAPNMMDFIQQRY
CMVSLLDSVQFMKIEDVEAVDLRLLPPIDSPSKIIGVDCNYVDNCDEQHI
SIPREPSFHVKFASSITGALDNIRAHSSAKHIDYGCQLAVVMGKRCREVS
PKEALNHVFGFMVVQDIVARDWNVPLGGHSMDTFLPLGPTIVHRCHVPDL
NNLWIKTIINGEERQTGNTRNMIFKIDFLIHRLSQYLTLCPGDIILTGTP
AGSGAFRHPSCFLKPGDLIESEIQNLGKMCNKVVNSYS*
BS29722.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:26:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11251-PA | 338 | CG11251-PA | 1..338 | 1..338 | 1801 | 100 | Plus |
| CG6028-PA | 293 | CG6028-PA | 5..291 | 53..334 | 648 | 45.8 | Plus |
| CG5793-PB | 220 | CG5793-PB | 12..217 | 128..333 | 249 | 31.3 | Plus |
| CG5793-PE | 220 | CG5793-PE | 12..217 | 128..333 | 249 | 31.3 | Plus |
| CG5793-PD | 220 | CG5793-PD | 12..217 | 128..333 | 249 | 31.3 | Plus |
