BS29724.complete Sequence
1004 bp assembled on 2012-05-24
GenBank Submission: KX806435
> BS29724.complete
GAAGTTATCAGACGACATGGCTGTGCTACCACCAGATCCTGTATTCAGCC
TGCGCTCCCCCGACATGGGAGCCGTAAACTCTCTGTGTTTCCAGGAGAGC
GACCGATTGCTGGCGGGAACCATCAAAGGCAGCGTTTTCCTCTGGGATTT
GCAAACCAACCGCTCCGCTCTGCACTTTGAGGTGGGATCCGACCCCATAA
CCAGTCTGCACCACACCCCTGATCGCCTGGTGACCCAGGAGAAGGGCGGC
ACTATCACCATGTTCTCCATCGGCGGCAGTAGCTACGTTAAAGAGCGCAG
TATTCCAGGCAATCACCTGGGCTTTTGCCGATCTGCCTTGCACACGAACA
CCAGCAAGACCAACGAGCAGCTGCTCTTCTATCCCTGCGAGGAATCGTCC
ATCGGAGTGCTTCACGTTACGGATGCAGCGGCCCCCACGCAAATACTGGT
CCCAGATGATCCCCAACTGCCCAAACTGGGTAGCGTCACCTGCTTCAAGC
CCTTCGAGTGCGCCTCGCAACTGTTCCTGCTCGCTGGCTACGAATCGGGA
CACTTCCTCACCTGGGACATCAGCTCGAGCGTTATTTTGGATGTGATGGA
ATTGGCCCAAGATGCTACGTCTGTGGACTACGATCCAGTTACGAATCGTG
GCATTGTGGGTGGTCCAACCGACAAGTTGATTAGTTTCAGTTATCAGCGC
TCATCGATGCAAATGCAGCTCGGCTCGGAGCTGTGCATCAAGAATCCTGG
AGTGAATGGCGTTCGCATTCGGCCCGATCAGAAGGTGTTCGCCAGTGCCG
GCTGGGATGGTCGTATTCGGATCTTCTCGTGGAAAAGCCTGCGACCGCTG
GCCGTGCTTACGCAGCACAAGAATGGCGGCGTAATGGACTTGGCCTTCTC
CAGCCAACAGGTGGCCATGTGGCATGCTCCCATCATGGCAGCAGCGGGCA
TGGATGGCCAGATATCATTGTGGGACCTCTACAACTGAAAGCTTTCTAGA
CCAT
BS29724.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:22:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13192-RA | 972 | CG13192-PA | 1..972 | 17..988 | 4845 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:22:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13192-RA | 1343 | CG13192-RA | 72..1044 | 17..989 | 4850 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:22:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11825901..11826414 | 155..668 | 2570 | 100 | Plus |
| 2R | 25286936 | 2R | 11826478..11826798 | 669..989 | 1605 | 100 | Plus |
| 2R | 25286936 | 2R | 11825416..11825553 | 17..154 | 675 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:22:33 has no hits.
BS29724.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:04 Download gff for
BS29724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13192-RA | 52..1022 | 17..987 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:13 Download gff for
BS29724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13192-RA | 72..1042 | 17..987 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:35 Download gff for
BS29724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13192-RA | 72..1042 | 17..987 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:35 Download gff for
BS29724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11825416..11825553 | 17..154 | 99 | -> | Plus |
| 2R | 11825901..11826414 | 155..668 | 100 | -> | Plus |
| 2R | 11826478..11826796 | 669..987 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:13 Download gff for
BS29724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7712921..7713058 | 17..154 | 99 | -> | Plus |
| arm_2R | 7713406..7713919 | 155..668 | 100 | -> | Plus |
| arm_2R | 7713983..7714301 | 669..987 | 100 | | Plus |
BS29724.pep Sequence
Translation from 16 to 987
> BS29724.pep
MAVLPPDPVFSLRSPDMGAVNSLCFQESDRLLAGTIKGSVFLWDLQTNRS
ALHFEVGSDPITSLHHTPDRLVTQEKGGTITMFSIGGSSYVKERSIPGNH
LGFCRSALHTNTSKTNEQLLFYPCEESSIGVLHVTDAAAPTQILVPDDPQ
LPKLGSVTCFKPFECASQLFLLAGYESGHFLTWDISSSVILDVMELAQDA
TSVDYDPVTNRGIVGGPTDKLISFSYQRSSMQMQLGSELCIKNPGVNGVR
IRPDQKVFASAGWDGRIRIFSWKSLRPLAVLTQHKNGGVMDLAFSSQQVA
MWHAPIMAAAGMDGQISLWDLYN*
BS29724.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13192-PA | 323 | CG13192-PA | 1..323 | 1..323 | 1696 | 100 | Plus |
