BS29726.complete Sequence
1082 bp assembled on 2012-05-24
GenBank Submission: KX804164
> BS29726.complete
GAAGTTATCAGTCGACATGGGTCACCGCAACATTTGCTGCAACGGCTGTC
AAATGACGATCTTCCAGGGTAGCCGCTTCCGGTGTTTGCGCTGCGTGAAC
TATAACCTATGTGACATATGCTACGATCATCAGATAGAAACGGAAGAGCA
TCGCGCCAATCATCCCATGCAATTGTTCCCTGACTCGGACGATCTGGTTC
CGCTGCTTTACGGCGAAATCCCAGAGCTGGTCCACCTGTCCAATTGCTTC
ACCTGTCCACATTGCGGCCTACTTGCGCTCACAGCGAAGCGGTTCATCGA
ACATGTTTACGTTCAACATCGGGTGTCCAATGAATATGTGGTCTGCCCCA
TGTGCGCCGGACTGTCGGCCGCCGAACTGGTGGCCATACGCCACCTTTCC
AAACATCTCCTGCACAACCACATCGATCACGCCAATTACCTAGAGCCCGA
CACACCGCCACTACGCCGAATATTTACCCGTAATCACATGCGCCACCACC
GCCAATCGCAGTTGCAAACAACTCCGAATTCAAGGATATTCGATATATCC
GTATGGCTGTCAACTGGACGTGTGAGCTCCGATCCCCAGCTCCTAAGCAA
CAATGATCCTCCAGAGGAGGCAGCCAATTCAGAGTCCCTGGCGTTAGGCT
TGAGTTCCGGGGGGCCATTCGAACACGACGACGACAGATATGTTCTACTT
CAGTGGATTGCACAGCAAAAAGTGCAGTGCCACGATACGGACGAATCTCA
AAGGCTGCGGCGAACCCTCTTCGTTGAGCACTTGCTGATTTCCATGCTGT
GCTGCGAGGAGTTGCAGTTGCCGGATGGAGACAGACGAATACGGGAAGGA
AATGGGGAGAGTGATCTAGACCAGGAAAACCATAGCAGTCTGGTCAAGGT
CATGTCAGTGATGTCACTGCCGTGGACAGGAGTTTGGCAGACCAACCAGC
TAGACGGATCGGAGGGGGAAGGCGAGATACGGGCAGCCAAAAAAGATGGA
GTCGATCTGGACAAGGTGCAGATCGAGGAGCACAAAAGGGTGGCTGCTGA
GGAGGCCATTGATTAGAAGCTTTCTAGACCAT
BS29726.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:23:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42585-RA | 1050 | CG42585-PA | 1..1050 | 17..1066 | 5250 | 100 | Plus |
| CG31835-RA | 1050 | CG31835-PA | 1..1050 | 17..1066 | 5250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:23:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42585-RA | 1225 | CG42585-RA | 109..1158 | 17..1066 | 5250 | 100 | Plus |
| CG31835-RA | 1225 | CG31835-RA | 109..1158 | 17..1066 | 5250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:23:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14735951..14737000 | 17..1066 | 5250 | 100 | Plus |
| 2L | 23513712 | 2L | 14740022..14741071 | 17..1066 | 5250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:23:13 has no hits.
BS29726.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:11 Download gff for
BS29726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42585-RA | 109..1158 | 17..1066 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:33 Download gff for
BS29726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42585-RA | 109..1158 | 17..1066 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:48 Download gff for
BS29726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31835-RA | 109..1158 | 17..1066 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:48 Download gff for
BS29726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14735951..14737000 | 17..1066 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:33 Download gff for
BS29726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14735951..14737000 | 17..1066 | 100 | | Plus |
BS29726.pep Sequence
Translation from 16 to 1065
> BS29726.pep
MGHRNICCNGCQMTIFQGSRFRCLRCVNYNLCDICYDHQIETEEHRANHP
MQLFPDSDDLVPLLYGEIPELVHLSNCFTCPHCGLLALTAKRFIEHVYVQ
HRVSNEYVVCPMCAGLSAAELVAIRHLSKHLLHNHIDHANYLEPDTPPLR
RIFTRNHMRHHRQSQLQTTPNSRIFDISVWLSTGRVSSDPQLLSNNDPPE
EAANSESLALGLSSGGPFEHDDDRYVLLQWIAQQKVQCHDTDESQRLRRT
LFVEHLLISMLCCEELQLPDGDRRIREGNGESDLDQENHSSLVKVMSVMS
LPWTGVWQTNQLDGSEGEGEIRAAKKDGVDLDKVQIEEHKRVAAEEAID*
BS29726.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42585-PA | 349 | CG42585-PA | 1..349 | 1..349 | 1887 | 100 | Plus |
| CG31835-PA | 349 | CG31835-PA | 1..349 | 1..349 | 1887 | 100 | Plus |
| CG3526-PC | 221 | CG3526-PC | 18..147 | 2..132 | 221 | 31.3 | Plus |
| CG3526-PA | 229 | CG3526-PA | 26..155 | 2..132 | 221 | 31.3 | Plus |
| CG11984-PI | 599 | CG11984-PI | 4..120 | 3..120 | 218 | 33.9 | Plus |
