BS29728.complete Sequence
1100 bp assembled on 2012-05-24
GenBank Submission: KX805554
> BS29728.complete
GAAGTTATCAGTCGACATGTTAGAGGAACTTGCAAAAGACGACGAGAAGA
TGGATGGAAACCACACCGATGCTAATCAGATCATCAAGGATCGCCGAAGA
CAGGAGGAGCATTATTTCAAGCTTTATGGCCGCATTGAGATACACGAATG
GCTGTTGAAGGATTCAGTCCGAATTAAAGCCTACCGCGAGGCCATCCAGC
ACAACGAGTTCTTCAGGCACAAGACTGTCCTGGATGTTGGCTGCGGCATG
GGCGTCCTTTCGATGTTCGCAGCCAAGGCGGGTTCCAAAAGGGTCCTGGC
AGTAGAGGCGGCCACCATTTCGGAATTTGCCCAACAGGTAGTCCAGGATA
ATGAATTCGGCAGAGTTATACAGGTGATTCAGGGAAAAGTAGAGGACATT
GAACTGCCTGATGGGATCAAAAAGGTGGATATTATAGTGTGCGACTGGAT
GGGCTCCTGCCTGTTTTCTGGAAATATGCTCGAGTCGTTATTATTTGCGC
GGGACAAGTGGCTATCGGCCACAGGCCACATCTATCCGGACACGGCGCAG
CTTTATCTGGCGGCCATCAAGGGACGCGACCAGGATCTTGGATTCTGGCA
CGATGTGCACGGCTTCGACCTGTCCGCCATCCGGCGCAGATGCGAGTCCA
AGGCGGTGGTGGAGCACGTGACCGGTGACCAGATGATGAGCAGGGTGTGC
CTGGTCAAATCGCTGGATCTGTACACCGAGCCCCGCCAATCCGCCAAGTC
TCGTTCGCTATTCGAGCTAAAGGTCAGCCGAAATGGCTGGGTTCACGGCC
TGGTGGCCTACTTTGATGTCGGATTCAGCAAGAGTACGCAAAGGATCAGC
TTCAGCACATCGCCCTCTGCTCCGTGGACCCATTGGAACCAAACGGTCTT
CTATCTGGAGACACCACTGCCTGTTAGGGCAGGTGAGTGCATCAAGGGCG
TGCTCACCATGAAACCCAGCGAGGACAGCATCTTTGACACGGAATTCGAC
ATTTTTGTGAACTTCGATGGCCGTGAGAAATCGGTTACCATCCATCAGTC
CTTTGTGCTCTCCGATCCCCTAACACTTTGTTGAAAGCTTTCTAGACCAT
BS29728.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:23:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Art2-RB | 1068 | CG3675-PB | 1..1068 | 17..1084 | 5340 | 100 | Plus |
| Art2-RA | 1068 | CG3675-PA | 1..1068 | 17..1084 | 5340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:23:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Art2-RB | 1595 | CG3675-RB | 185..1252 | 17..1084 | 5340 | 100 | Plus |
| Art2-RA | 1436 | CG3675-RA | 26..1093 | 17..1084 | 5340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:23:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4278039..4278670 | 1084..453 | 3160 | 100 | Minus |
| 2L | 23513712 | 2L | 4278796..4279029 | 453..220 | 1170 | 100 | Minus |
| 2L | 23513712 | 2L | 4279084..4279290 | 223..17 | 1035 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:23:22 has no hits.
BS29728.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:12 Download gff for
BS29728.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art2-RA | 31..1092 | 22..1083 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:36 Download gff for
BS29728.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art2-RA | 31..1092 | 22..1083 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:52 Download gff for
BS29728.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art2-RA | 31..1092 | 22..1083 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:52 Download gff for
BS29728.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4278040..4278669 | 454..1083 | 100 | <- | Minus |
| 2L | 4278796..4279025 | 224..453 | 100 | <- | Minus |
| 2L | 4279084..4279285 | 22..223 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:36 Download gff for
BS29728.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4278040..4278669 | 454..1083 | 100 | <- | Minus |
| arm_2L | 4278796..4279025 | 224..453 | 100 | <- | Minus |
| arm_2L | 4279084..4279285 | 22..223 | 100 | | Minus |
BS29728.pep Sequence
Translation from 16 to 1083
> BS29728.pep
MLEELAKDDEKMDGNHTDANQIIKDRRRQEEHYFKLYGRIEIHEWLLKDS
VRIKAYREAIQHNEFFRHKTVLDVGCGMGVLSMFAAKAGSKRVLAVEAAT
ISEFAQQVVQDNEFGRVIQVIQGKVEDIELPDGIKKVDIIVCDWMGSCLF
SGNMLESLLFARDKWLSATGHIYPDTAQLYLAAIKGRDQDLGFWHDVHGF
DLSAIRRRCESKAVVEHVTGDQMMSRVCLVKSLDLYTEPRQSAKSRSLFE
LKVSRNGWVHGLVAYFDVGFSKSTQRISFSTSPSAPWTHWNQTVFYLETP
LPVRAGECIKGVLTMKPSEDSIFDTEFDIFVNFDGREKSVTIHQSFVLSD
PLTLC*
BS29728.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Art2-PB | 355 | CG3675-PB | 1..355 | 1..355 | 1862 | 100 | Plus |
| Art2-PA | 355 | CG3675-PA | 1..355 | 1..355 | 1862 | 100 | Plus |
| Art1-PA | 376 | CG6554-PA | 36..362 | 10..335 | 768 | 46.4 | Plus |
| Art6-PA | 341 | CG9927-PA | 4..337 | 18..346 | 705 | 42.8 | Plus |
| Art3-PB | 474 | CG6563-PB | 163..464 | 30..331 | 467 | 35.2 | Plus |
