BS29732.complete Sequence
1055 bp assembled on 2012-05-24
GenBank Submission: KX802395
> BS29732.complete
GAAGTTATCAGTCGACATGATGAAGCGACAGAATGTCCGTACCCTTTCCC
TGGTGGTATGCACTTTCACCTATCTTTTAATTGGAGCCGCCGTGTTCGAT
TCCCTGGAGTCACCAACGGAGGCCAAAAGATGGGAATTCCTACAGACCGT
TAAGAACAACTTTGTTAGAAAGTACAATGTGACTGACGAGGATTTCCGTG
TGATGGAAATCGTCATCATTGAAAATAAGCCCCACAAGGCCGGACCTCAG
TGGAAATTCGCTGGAGCTTTCTATTTCAGCACGGTTGTACTGGCAATGAT
AGGATATGGTCATTCTACGCCAGTTACAATTCCGGGAAAAGCATTTTGTA
TGGGCTATGCTATGGTGGGCATCCCGCTGGGTCTGGTGATGTTCCAGTCT
ATCGGAGAACGTCTGAATAAGTTTGCATCCGTGATAATAAGGCGGGCAAA
GAGAGCCAGTGGAGCTCGCTGTACGGATGCCACCGAAATGAATCTCATGT
TGGCCACCGGAATGCTCTCCTCCATAATAATCACCACTGGAGCAGCAGTC
TTTTCCCGATACGAGGGTTGGAGCTACTTCGATAGCTTCTACTATTGTTT
TGTCACCTTGACGACAATTGGTTTCGGCGATTATGTGGCATTGCAGAACG
ACCAAGCTCTAACTAATAAGCCTGGCTATGTGGCGCTGAGCTTGGTCTTC
ATCCTATTCGGCTTGGCCGTGGTGGCCGCCAGTATCAATCTATTGGTGCT
CCGATTCATGACCATGCAAGCAGAGGATGCCAAGAGAGATGAGCAGGATG
CTCAGAACTTGGCTGGAAATGCCCAGCCGGTGACCTTCGATGATGAGTCC
ACGTACAATATGCACGGCAAGCTGCTGGAGAACAACTACACAACGGAGAA
CGATGAGACCGCCTCCCTGTGTTCCTGCACCTGCATGGGTGGCACCAGGT
GCCTGAATCATGAGCAGTTCGTGGACCCGGACTTTCAGCCTACCGACATT
ATCGAGAGCACCTTGTGCCTGAAGCGAGCCTCCGTCTGAAAGCTTTCTAG
ACCAT
BS29732.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:23:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Task7-RA | 1023 | CG9361-PA | 1..1023 | 17..1039 | 5115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:23:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Task7-RA | 1727 | CG9361-RA | 277..1299 | 17..1039 | 5115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:23:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9411085..9411487 | 766..364 | 2015 | 100 | Minus |
| 3R | 32079331 | 3R | 9410757..9411030 | 1039..766 | 1370 | 100 | Minus |
| 3R | 32079331 | 3R | 9411668..9411824 | 303..147 | 785 | 100 | Minus |
| 3R | 32079331 | 3R | 9411888..9412017 | 146..17 | 650 | 100 | Minus |
| 3R | 32079331 | 3R | 9411539..9411605 | 366..300 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:23:38 has no hits.
BS29732.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:15 Download gff for
BS29732.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Task7-RA | 277..1298 | 17..1038 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:43 Download gff for
BS29732.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Task7-RA | 277..1298 | 17..1038 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:01 Download gff for
BS29732.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Task7-RA | 277..1298 | 17..1038 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:01 Download gff for
BS29732.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9410758..9411030 | 766..1038 | 100 | <- | Minus |
| 3R | 9411086..9411486 | 365..765 | 100 | <- | Minus |
| 3R | 9411541..9411602 | 303..364 | 100 | <- | Minus |
| 3R | 9411669..9411824 | 147..302 | 100 | <- | Minus |
| 3R | 9411888..9412017 | 17..146 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:43 Download gff for
BS29732.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5236480..5236752 | 766..1038 | 100 | <- | Minus |
| arm_3R | 5236808..5237208 | 365..765 | 100 | <- | Minus |
| arm_3R | 5237263..5237324 | 303..364 | 100 | <- | Minus |
| arm_3R | 5237391..5237546 | 147..302 | 100 | <- | Minus |
| arm_3R | 5237610..5237739 | 17..146 | 100 | | Minus |
BS29732.pep Sequence
Translation from 16 to 1038
> BS29732.pep
MMKRQNVRTLSLVVCTFTYLLIGAAVFDSLESPTEAKRWEFLQTVKNNFV
RKYNVTDEDFRVMEIVIIENKPHKAGPQWKFAGAFYFSTVVLAMIGYGHS
TPVTIPGKAFCMGYAMVGIPLGLVMFQSIGERLNKFASVIIRRAKRASGA
RCTDATEMNLMLATGMLSSIIITTGAAVFSRYEGWSYFDSFYYCFVTLTT
IGFGDYVALQNDQALTNKPGYVALSLVFILFGLAVVAASINLLVLRFMTM
QAEDAKRDEQDAQNLAGNAQPVTFDDESTYNMHGKLLENNYTTENDETAS
LCSCTCMGGTRCLNHEQFVDPDFQPTDIIESTLCLKRASV*
BS29732.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Task7-PA | 340 | CG9361-PA | 1..340 | 1..340 | 1765 | 100 | Plus |
| Task6-PE | 397 | CG9637-PE | 1..311 | 2..314 | 914 | 56 | Plus |
| Task6-PD | 397 | CG9637-PD | 1..311 | 2..314 | 914 | 56 | Plus |
| Task6-PF | 408 | CG9637-PF | 1..311 | 2..314 | 914 | 56 | Plus |
| Task6-PC | 408 | CG9637-PC | 1..311 | 2..314 | 914 | 56 | Plus |
