BS29734.complete Sequence
1139 bp assembled on 2012-05-24
GenBank Submission: KX801149
> BS29734.complete
GAAGTTATCAGTCGACATGAATCTAACGAAGTATAACTATCGAAAGTCTA
AATATAATAAGTCTCGCATTTTGAATTGCGATAAATTGAGACCAGAAAAT
CTGTACATGAATTGCGTCGATGTTAAAGGCAAACTTTATAGCCTATCGCT
AAAAAAACATCATTCCAAACGAAATAAACGTCTTAAAATCAGATCTCTTC
GATCCGAAAAGTATAAATTTTCGAATATATTTAAACGCAAATCGCGAAGG
CAAACAGCTAAGAATACTACTGATAAGGGGCTAATGGATTGTGACGTAAA
TATGGAACCTTCACGATATGTGCCGCCCATTACAAATCCAATGGAAAGGA
TCAGCGAAGCCGGGACTAAAAATCAACCGCATAAGTTGGAAACTGAGAAA
CCACGACGACTGCGCGGAAGGCCGAAAAATATTGTGAAATCCTCTAGTCT
TATTGCTTCAGACCATCGCAAGGAAAATCCTATGGAAATAAACGATGAAC
AGAAGACTTTCACAAAGATATTAAAGAAAGTAAAGCTCAAGGTCGACGAT
TATTTGAAGGACATGAAGCTGGCTGCTGCTTTTCGCAAGCAACAGAAAAA
GTCGCAGCTACAAGTTAGTCGCCGAAAATTAGGATTAGCTAAGCAGCGTC
AACTAGGACGATCCAAAAAGGATTCATCAAAAGTGAAGGAGAGACAAATG
GATGAGCAATCAGTGGTTATACAACAAGGTGCGGGGATTCGAGCTGCAAA
ACTTAAAAAGGACCAGCAGCTATTGGAAAGAAACGTGCAGGAGGATAAAA
AGAAACTGAATTCCAGAATTTCAATGGATTGGGAAAAATTAGATAGTCCA
GAAAAGGTTAAAGAACCACCCATTGTATTACGACGCAGTGCCCGGATTCA
AGCGGCAAAACTCAAGAAGGAGACATTGGAAGCCAATATGAGAAAGAGCA
AACAGGAGAAAGTCAGTACTACTACTAAAACGGTATCGAAACCTAGAATC
ACTCAACTAGCAGTGTGTCGTTTATGTCCTAATTGCAATTCTATTAACTA
TCTTAGTCCGCCGTATTCGAATACATACTTTGAATGCGCCGATATAAACG
GAAGGCTCTATAAACTAAATTAAAAGCTTTCTAGACCAT
BS29734.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:23:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10734-RA | 1107 | CG10734-PA | 1..1107 | 17..1123 | 5535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:23:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10734-RA | 1449 | CG10734-RA | 153..1260 | 17..1124 | 5540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:22:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16157456..16158563 | 1124..17 | 5540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:22:59 has no hits.
BS29734.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:08 Download gff for
BS29734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10734-RA | 153..1257 | 17..1121 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:26 Download gff for
BS29734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10734-RA | 153..1257 | 17..1121 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:45 Download gff for
BS29734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10734-RA | 153..1257 | 17..1121 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:45 Download gff for
BS29734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16157459..16158563 | 17..1121 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:26 Download gff for
BS29734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12044964..12046068 | 17..1121 | 100 | | Minus |
BS29734.pep Sequence
Translation from 16 to 1122
> BS29734.pep
MNLTKYNYRKSKYNKSRILNCDKLRPENLYMNCVDVKGKLYSLSLKKHHS
KRNKRLKIRSLRSEKYKFSNIFKRKSRRQTAKNTTDKGLMDCDVNMEPSR
YVPPITNPMERISEAGTKNQPHKLETEKPRRLRGRPKNIVKSSSLIASDH
RKENPMEINDEQKTFTKILKKVKLKVDDYLKDMKLAAAFRKQQKKSQLQV
SRRKLGLAKQRQLGRSKKDSSKVKERQMDEQSVVIQQGAGIRAAKLKKDQ
QLLERNVQEDKKKLNSRISMDWEKLDSPEKVKEPPIVLRRSARIQAAKLK
KETLEANMRKSKQEKVSTTTKTVSKPRITQLAVCRLCPNCNSINYLSPPY
SNTYFECADINGRLYKLN*
BS29734.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10734-PA | 368 | CG10734-PA | 1..368 | 1..368 | 1882 | 100 | Plus |
