BS29735.complete Sequence
1298 bp assembled on 2012-05-24
GenBank Submission: KX804956
> BS29735.complete
GAAGTTATCAGTCGACATGACACACGAAGGAAGTAACGATTTTGTGGTGC
TCACCGACGTGGTGCGCAAGCAATATGTGCTCTATTTGGAGCGCCAGCTG
CAGGAGAATGTCTGCGCCTGGGCCAACCAATCCCGTAATCGCCACAAGCC
CACAGCCTGGGCGTGCATTCCCGCGAGCTTGGAGCAACTGGAGAACAAGG
CGAAGAAGGCTTCCATGGCGGCACAGATCTACCAAAGAGCCATGGTCAAA
ACGATAGCTGCGGTACGTAGGAACACTCAGGAATGCCGTTTGGCCAACAT
TCTATTTGAACAAATGCAGCATGCAGCTGGAGAGGATGCTGTGCCCGTAA
AAACAGACCACCGTCTGGTGGATAAGGCCACACAAACAACCGTCATAGAA
GCCCAGAATGGCCACATAACTCCTACGGAGGACTACGATGATGATAGCTA
TGAGCTGCGTAGAAAAATCGATATGTTTCAGGCTAGTCTCGAACGGTCGG
AAGTTCAGAACGAAACGCATTGCCCACATTGCCGTAGTAAGATCATGACC
CCAGAGAATAAGCCCCTAGCCAATCAAGAATCTCTCTACTCCGAAACCGA
AGATGCTGTGGCCCAGGAGTTGGCCATGTTGTTTGGAGAAGAGCCTACTG
ATCTTAATCATATATTCGGCATCGAACCAACTGCTGTTACTGACGATCCG
CAGATCTCGGCCATACTAAAGGAAATAGCGAATGCGGAACTACCTGAAAA
AATTGAGCATCCACCCACATCCCCAACCGCCACACCACCAACTGGGCATC
ACAGCGAGGTGGATCTTCGCCAGAGTCGCTGGCCTTGCGAACTCTACGCC
CAGAGGAGGCGTCTCAATGCCTGTTTAGTTCGCTTACTGGAAGCGGATTG
GCGGTGCGAGGACCGCTTGAGATATAAGTTTCACCTGATTTTTGGCGAAG
ACAGCGATGATGAGTTCGCAAACCAGTTATCCAGCCCGTCAATTGATTTA
GTGGACGAAGTTCTGCTGGCCAGCTGCTTGCTTCGTATTCGCCCATGGAT
TGTACGTCATTTGATGTCTCCCCTGGAGGAGGGCCTTATCGCCAATCGAT
TTCTGTTCAAGAAGCTAGCCAAGATGCTGGCGCACTCCATTGTCATGGTC
AATCCATATTGCTCCGAGCTGGAGATCAAGCAGGCTGTTGAGCACTTGTT
CTGCCTTAGACCTAGAGGAATCCAGAGCGCATATGATCTGGACAATCTGC
CACCCTTGGAGGTCTCAAAATTCGAAGTTTAAAAGCTTTCTAGACCAT
BS29735.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:23:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11983-RB | 1266 | CG11983-PB | 1..1266 | 17..1282 | 6330 | 100 | Plus |
| CG11983-RA | 1266 | CG11983-PA | 1..1266 | 17..1282 | 6330 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:23:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11983-RB | 1664 | CG11983-RB | 117..1382 | 17..1282 | 6330 | 100 | Plus |
| CG11983-RA | 1813 | CG11983-RA | 266..1531 | 17..1282 | 6330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:23:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9008963..9009992 | 253..1282 | 5150 | 100 | Plus |
| 3R | 32079331 | 3R | 9008713..9008905 | 61..253 | 965 | 100 | Plus |
| 3R | 32079331 | 3R | 9008586..9008632 | 17..63 | 235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:23:03 has no hits.
BS29735.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:09 Download gff for
BS29735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11983-RA | 152..1415 | 17..1280 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:29 Download gff for
BS29735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11983-RA | 266..1529 | 17..1280 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:46 Download gff for
BS29735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11983-RA | 266..1529 | 17..1280 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:46 Download gff for
BS29735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9008714..9008905 | 62..253 | 100 | -> | Plus |
| 3R | 9008586..9008630 | 17..61 | 100 | -> | Plus |
| 3R | 9008964..9009990 | 254..1280 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:29 Download gff for
BS29735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4834308..4834352 | 17..61 | 100 | -> | Plus |
| arm_3R | 4834436..4834627 | 62..253 | 100 | -> | Plus |
| arm_3R | 4834686..4835712 | 254..1280 | 100 | | Plus |
BS29735.pep Sequence
Translation from 16 to 1281
> BS29735.pep
MTHEGSNDFVVLTDVVRKQYVLYLERQLQENVCAWANQSRNRHKPTAWAC
IPASLEQLENKAKKASMAAQIYQRAMVKTIAAVRRNTQECRLANILFEQM
QHAAGEDAVPVKTDHRLVDKATQTTVIEAQNGHITPTEDYDDDSYELRRK
IDMFQASLERSEVQNETHCPHCRSKIMTPENKPLANQESLYSETEDAVAQ
ELAMLFGEEPTDLNHIFGIEPTAVTDDPQISAILKEIANAELPEKIEHPP
TSPTATPPTGHHSEVDLRQSRWPCELYAQRRRLNACLVRLLEADWRCEDR
LRYKFHLIFGEDSDDEFANQLSSPSIDLVDEVLLASCLLRIRPWIVRHLM
SPLEEGLIANRFLFKKLAKMLAHSIVMVNPYCSELEIKQAVEHLFCLRPR
GIQSAYDLDNLPPLEVSKFEV*
BS29735.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11983-PB | 421 | CG11983-PB | 1..421 | 1..421 | 2202 | 100 | Plus |
| CG11983-PA | 421 | CG11983-PA | 1..421 | 1..421 | 2202 | 100 | Plus |
