BS29736.complete Sequence
752 bp assembled on 2012-05-24
GenBank Submission: KX801087
> BS29736.complete
GAAGTTATCAGTCGACATGACAACTGCCGAATTGCAAGGTTCCTATGGAG
GCCTCTACTTTGGCTTCTGCACACTGATCTCGCATGTGCTTCTGGCGGGG
ATCACCGTAGCCATTGTTTACAAGTGTCTGGTGCTCAAATTGGTGCACAC
CGCCGGACATGCCTTCTACTGCACAATCGGCTTTGTGTTTTTCATGGGCG
AAGCATTGCTGGTCCGGAATAGCGCATATTTGGAGTCCTCGTTGGGTCCA
TTGAACCTCAACCGCCTGCACGCCGTCCTGGGGCTGTTGGCATTCCTGGT
CGGAGCCGGCGGAATCGGAATCAAGACATGGCAGAAGCTGGAGCGCAAAC
GGGAAGACCCCAATGCCACCGTTCGTCACTTTAAGAGCAACCATGCTTTT
TACGGTATAATCGGTTGTGCTCTTCTTCTGGGTAGCGTTCTGAGCGGTCT
TCCGCTGTATTTCATCAACAGTGGCTTCGCCTTGAAAATGCTTCATCGAT
TTTTCGGATTGTCCGGATTCCTCGTTCTGATGGTATCTCAAATGTTCGGA
TATAACACGGGATTCGGTCGGCGACAGTGGAAGGCACACCACCAGAAGCT
CTTCAAATTTTTCACATTTATTGCCACCATTACGACTGCAAATTACGAAC
TCCGGAGATTTGTGCGAGATGTTGCCGGCTTGGCGACAGACTATTTTATT
GGATCAGATGCAGCAGAAGCTAGAGAAGATCTTTGAAAGCTTTCTAGACC
AT
BS29736.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:23:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10337-RA | 720 | CG10337-PA | 1..720 | 17..736 | 3600 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:23:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10337-RA | 1297 | CG10337-RA | 149..868 | 17..736 | 3600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:23:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19545805..19546137 | 736..404 | 1665 | 100 | Minus |
| 2L | 23513712 | 2L | 19546201..19546425 | 406..182 | 1125 | 100 | Minus |
| 2L | 23513712 | 2L | 19546647..19546811 | 181..17 | 825 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:23:09 has no hits.
BS29736.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:10 Download gff for
BS29736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10337-RA | 104..822 | 17..735 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:31 Download gff for
BS29736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10337-RA | 149..867 | 17..735 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:48 Download gff for
BS29736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10337-RA | 149..867 | 17..735 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:48 Download gff for
BS29736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19545806..19546136 | 405..735 | 100 | <- | Minus |
| 2L | 19546203..19546425 | 182..404 | 100 | <- | Minus |
| 2L | 19546647..19546811 | 17..181 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:31 Download gff for
BS29736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19546647..19546811 | 17..181 | 100 | | Minus |
| arm_2L | 19545806..19546136 | 405..735 | 100 | <- | Minus |
| arm_2L | 19546203..19546425 | 182..404 | 100 | <- | Minus |
BS29736.pep Sequence
Translation from 16 to 735
> BS29736.pep
MTTAELQGSYGGLYFGFCTLISHVLLAGITVAIVYKCLVLKLVHTAGHAF
YCTIGFVFFMGEALLVRNSAYLESSLGPLNLNRLHAVLGLLAFLVGAGGI
GIKTWQKLERKREDPNATVRHFKSNHAFYGIIGCALLLGSVLSGLPLYFI
NSGFALKMLHRFFGLSGFLVLMVSQMFGYNTGFGRRQWKAHHQKLFKFFT
FIATITTANYELRRFVRDVAGLATDYFIGSDAAEAREDL*
BS29736.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10337-PA | 239 | CG10337-PA | 1..239 | 1..239 | 1241 | 100 | Plus |
| CG3592-PA | 249 | CG3592-PA | 30..231 | 13..222 | 298 | 36.7 | Plus |
