Clone BS29741 Report

Search the DGRC for BS29741

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:297
Well:41
Vector:pDNR-Dual
Associated Gene/TranscriptCG15042-RA
Protein status:BS29741.pep: full length peptide match
Sequenced Size:1343

Clone Sequence Records

BS29741.complete Sequence

1343 bp assembled on 2012-05-24

GenBank Submission: KX804939

> BS29741.complete
GAAGTTATCAGTCGACATGGAAGGAGGCACTTTCAATCTGATGAAAACAG
AATCCATTCCCAGCTGCCTGCTTCAGCCCATCCGGGCGGTCCCCAAGTGC
GTCAACTCAAAGGAGATCCTAAGCAGTTTGGCGCGGAATCCGCGAAAGAG
CCGCCTATATCCTCCCCATGGCGGTCACATGCGGTCCGTTGTGGGAACCT
TCTACAAGATCACGGACCAAATCGGTGAAATTGCGATAGGCACCAAGTTA
ACCGGCACCGTGCTGCTCGAGAGCCTGCCGGTCTTCTACGTGACCATCAA
TGGACCGGGCTCCAAGCTTTTGAAATGTCTAGCCATGGGGCAGGTGCAAC
TGCAGGAACTGGAGCAGCTGCCCGACTATGGCGAAATCTTTGCATTCTAC
GACAAGGCCGAGAATCGCATCTCTCGCATCGCCATTAATGCCCCCGTTCA
CCCCATGGGCTACTGTGCCTATATGATCGACGCTGCCAAATATACCAACA
TGTCCGGCATGGAGCGCATCTTCGCGCTGCCGGATGATCTCAAGAAGCTG
CCGGCGCTAACGATCAAATGCCGCCTGGTCAATGTGGCCCAGATGCATAT
ATTTATTACCCAAAATGTTAGACTGCGCGTCCTCGGCAGTAATGGCCTTG
AACTGTTGGTGGCCCTGATCAGGAATAGGACCAACATTCGGAAGATTCCA
TCCGCACAACTACCACCAATTTCGGGCGATGAGTACGGAAATATGGATGC
AAACGATCGGGAAGTGGCCAAATCTTTTGCACGATATAGACCCAAGCGTC
GCGAACGTGGTAGCATTGTACGCGTCCATGTCACCAGGATCGTTAGCCAT
GCCGAATTCTACGCCCGATTCGCTGATGGACCAACAGTGCCCACGTGGAG
CAAGAGTGTTATGAAAAGGGGCACAGGTGATTTTCGCGTCTGGGACATCG
TTCTGGCCCCATATCAGGGGCGATATCATCGCGCCAAAATCGTTGACATA
TTTCGCTGCCGTTACCGTGTCTACTTTCTGGACTTCGGCATCACCGAGTA
TACAAGCAAGAAAAATCTAACATTTTGCTATGAGCTGGAGAAAGCCCAGC
ACAATCTGGCCTTTAGATTTGAAATATTGGGAACACGCCGTCAGTGTCCC
ATACCTTACATAAACATCCTAGAGGGCATAAAGCATCTGGAGCACACAGT
ACTACGAAGCGATATCAATGTTCGCATCCATAACATTTTGAAAGACGGTG
GATATGTGATTCGTTTAATGAAACATATTCACGAGTGCCATATGATTCAC
TTGTTTGACGATTATTATTCGAATTGAAAGCTTTCTAGACCAT

BS29741.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:24:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG15042-RA 1311 CG15042-PA 1..1311 17..1327 6555 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:24:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG15042-RA 1405 CG15042-RA 13..1323 17..1327 6555 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:24:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18526944..18528254 1327..17 6555 100 Minus
Blast to na_te.dros performed on 2014-11-28 11:24:00 has no hits.

BS29741.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:19 Download gff for BS29741.complete
Subject Subject Range Query Range Percent Splice Strand
CG15042-RA 13..1322 17..1326 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:54 Download gff for BS29741.complete
Subject Subject Range Query Range Percent Splice Strand
CG15042-RA 13..1322 17..1326 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:10 Download gff for BS29741.complete
Subject Subject Range Query Range Percent Splice Strand
CG15042-RA 13..1322 17..1326 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:10 Download gff for BS29741.complete
Subject Subject Range Query Range Percent Splice Strand
X 18526945..18528254 17..1326 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:54 Download gff for BS29741.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18420978..18422287 17..1326 100   Minus

BS29741.pep Sequence

Translation from 16 to 1326

> BS29741.pep
MEGGTFNLMKTESIPSCLLQPIRAVPKCVNSKEILSSLARNPRKSRLYPP
HGGHMRSVVGTFYKITDQIGEIAIGTKLTGTVLLESLPVFYVTINGPGSK
LLKCLAMGQVQLQELEQLPDYGEIFAFYDKAENRISRIAINAPVHPMGYC
AYMIDAAKYTNMSGMERIFALPDDLKKLPALTIKCRLVNVAQMHIFITQN
VRLRVLGSNGLELLVALIRNRTNIRKIPSAQLPPISGDEYGNMDANDREV
AKSFARYRPKRRERGSIVRVHVTRIVSHAEFYARFADGPTVPTWSKSVMK
RGTGDFRVWDIVLAPYQGRYHRAKIVDIFRCRYRVYFLDFGITEYTSKKN
LTFCYELEKAQHNLAFRFEILGTRRQCPIPYINILEGIKHLEHTVLRSDI
NVRIHNILKDGGYVIRLMKHIHECHMIHLFDDYYSN*

BS29741.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG15042-PA 436 CG15042-PA 1..436 1..436 2289 100 Plus
krimp-PA 746 CG15707-PA 273..726 31..418 427 29.1 Plus