BS29746.complete Sequence
1367 bp assembled on 2012-05-24
GenBank Submission: KX801136
> BS29746.complete
GAAGTTATCAGTCGACATGAAGGAGTGGCTGAAGATCTCCTGCCTCCTCT
GTGTCTTTGGCTGCATCCGCGAGATCCGTCCGTCGGAGCCCTACGTCACG
GAGTACCTGCTGGGTCCCTGGCGGAATATCACGGAGCAGCAGCTAACGCA
CGATGTTTACCCAGTGGGAACCTATTCCTACCTGGTGCAGTTGGTCTTTG
TATTTCTCATAACAGATTTTCTCAGATACAAGCCGCTGATCATCACAATT
GGAGCTGCGGGTGTGATAATATGGAGCATGCTCATCTGGACCACCAGCTT
GCTGTCGCTTCAGATCCTGGAGTTCTTCTTCGGCACTTACATGGCCGCAG
AGGTGGCCTACTATACGTACATCTATGCCAAAGTGGACAAGAAATACTAT
GCCAGAGTGACCTCCCACACCCGAGCAGCCATGTTTGCAGGCAAACTGGT
TTCCGGCATCACTTCCCAACTTATGCTCAATCTGGAGCTGATGAACTACA
AGGAGCTTAACTATATAACGCTGGGCACTCAGATTATAGCCATGCTTTGG
GCCTTTGGCCTGCCCCGCGTGGATAGGAGTCTTTACTTTCATCGGGAGCA
GTTGTCCATTACGGAGCCGCAGACTCAGCTACCCGGGGTGGGAAACCTGG
CTGAGATGGATCAGCAGCAGGAGAATACTCAGAAGCAGCCAGGAGCACTG
AGCCTTCTTTGGCTACATTTTCGGAATGCATACACCAATCCGCGAGTCGT
TCAGTGGAGTCTGTGGTACGCCATTGGACTGGCTGGTTACCTGCAGGTCA
CTTACTACGTTCAGGTTCTGTGGAAAGTGATCGAACCGGAGCCTGTTATT
GCGTGGAACGGCGCCGTTGATGCTGTCCTGACAGCTCTGGCTGCTCTAAG
TGCTTTGGCCGCTGGTTATCTGCACACCGGAAGGCTCAGACCGCGAGCAT
CTCTTCTGATCCTGGGCATTCTGTCCGCCGTGGAGGGCGGATGTGTGCTG
ATCTGTTGCTGGACACAGGACATCTACTGGTCGTATGCGGGCTTTGTGCT
CTTCGGCGCCCTCTACGGCTTTACCATCACGGTGGCGAGTGCTGAAGTGG
CCAGAAATCTGGAGGAGGAAAGCTTCGGCCTTGTCTTTGGTGTGAACACC
TTTGTGGCCCTCATTTTCCAGTCACTGTTAACCATAATCTTTGTCACGGA
CACTGGTTTTGAGCTCGATCCCGTTGGCCAGTACACGGCGTATGCATTCT
ATTTTATTGGCGTCGGCGTCTTGTATCTGATATCCGTGCTGATTGAGTAC
TTAATGTGCCGCAACAACGACGTCGAAAAGCTGGAAAATTCACTGGATTG
AAAGCTTTCTAGACCAT
BS29746.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:23:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6574-RA | 1335 | CG6574-PA | 1..1335 | 17..1351 | 6675 | 100 | Plus |
| CG14694-RA | 1341 | CG14694-PA | 334..435 | 350..451 | 255 | 83.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:23:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6574-RA | 1962 | CG6574-RA | 376..1710 | 17..1351 | 6675 | 100 | Plus |
| CG14694-RA | 1369 | CG14694-RA | 344..445 | 350..451 | 255 | 83.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:23:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10861105..10861666 | 1089..528 | 2810 | 100 | Minus |
| 3R | 32079331 | 3R | 10861725..10862030 | 527..222 | 1530 | 100 | Minus |
| 3R | 32079331 | 3R | 10860783..10861046 | 1351..1088 | 1320 | 100 | Minus |
| 3R | 32079331 | 3R | 10862488..10862613 | 142..17 | 630 | 100 | Minus |
| 3R | 32079331 | 3R | 10862344..10862429 | 225..140 | 430 | 100 | Minus |
| 3R | 32079331 | 3R | 10859305..10859406 | 451..350 | 255 | 83.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:23:43 has no hits.
BS29746.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:16 Download gff for
BS29746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6574-RA | 376..1709 | 17..1350 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:45 Download gff for
BS29746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6574-RA | 376..1709 | 17..1350 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:02 Download gff for
BS29746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6574-RA | 376..1709 | 17..1350 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:02 Download gff for
BS29746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10860784..10861044 | 1090..1350 | 100 | <- | Minus |
| 3R | 10861105..10861666 | 528..1089 | 100 | <- | Minus |
| 3R | 10861725..10862026 | 226..527 | 100 | <- | Minus |
| 3R | 10862344..10862426 | 143..225 | 100 | <- | Minus |
| 3R | 10862488..10862613 | 17..142 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:45 Download gff for
BS29746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6686506..6686766 | 1090..1350 | 100 | <- | Minus |
| arm_3R | 6686827..6687388 | 528..1089 | 100 | <- | Minus |
| arm_3R | 6687447..6687748 | 226..527 | 100 | <- | Minus |
| arm_3R | 6688066..6688148 | 143..225 | 100 | <- | Minus |
| arm_3R | 6688210..6688335 | 17..142 | 100 | | Minus |
BS29746.pep Sequence
Translation from 16 to 1350
> BS29746.pep
MKEWLKISCLLCVFGCIREIRPSEPYVTEYLLGPWRNITEQQLTHDVYPV
GTYSYLVQLVFVFLITDFLRYKPLIITIGAAGVIIWSMLIWTTSLLSLQI
LEFFFGTYMAAEVAYYTYIYAKVDKKYYARVTSHTRAAMFAGKLVSGITS
QLMLNLELMNYKELNYITLGTQIIAMLWAFGLPRVDRSLYFHREQLSITE
PQTQLPGVGNLAEMDQQQENTQKQPGALSLLWLHFRNAYTNPRVVQWSLW
YAIGLAGYLQVTYYVQVLWKVIEPEPVIAWNGAVDAVLTALAALSALAAG
YLHTGRLRPRASLLILGILSAVEGGCVLICCWTQDIYWSYAGFVLFGALY
GFTITVASAEVARNLEEESFGLVFGVNTFVALIFQSLLTIIFVTDTGFEL
DPVGQYTAYAFYFIGVGVLYLISVLIEYLMCRNNDVEKLENSLD*
BS29746.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6574-PA | 444 | CG6574-PA | 1..444 | 1..444 | 2311 | 100 | Plus |
| CG14694-PA | 446 | CG14694-PA | 1..432 | 1..429 | 1354 | 58.3 | Plus |
| CG17036-PB | 432 | CG17036-PB | 1..421 | 1..434 | 995 | 45.2 | Plus |
| CG17036-PA | 432 | CG17036-PA | 1..421 | 1..434 | 995 | 45.2 | Plus |
