BS29750.complete Sequence
2105 bp assembled on 2012-06-18
GenBank Submission: KX805419
> BS29750.complete
GAAGTTATCAGTCGACATGAATCCAATTATCAAGAAATATCGCCTGAGGC
TAAGGAGAACTGAACGGGACTCGACCATTGGCTATGTGTTTCGCATCATC
CGAATTGTCATTCTATTGTCTCTCTGGACCGGATCCACGATCATCCTGTT
TCTCCACAAGCCTGAAGAGCTCGCCACGTCGATGGTGACCGTGATGCCCA
ACAAGACGGCCTTCCGGAATGTTAAGATGAAGCAGGATTCCGTGGAGATA
CGCCTGAATGGTGCCATAAATGCGTATCTGACTAACCACAGGGTTAGGAC
ATCCAACTTTTCGGCTGTTGGAGTTCGATTGGAGTGGCGGGATCGAGGAA
TGAATCGTAGCCTTTGGCGCACTGGCATGTGGATGGTGTACATGTACAAG
GATAAGAAGAAGTACCTGCAGGTTAATAGGGTCTTTCAGTTCTCCATTTC
AGGATGGCAACAGGAGAGGTCCCTGATCCAGCGTACTTTGCCAACTGATC
GTAGTCTTGAGAACTCCGTCTATGACTGGGCCTTTGCGCAGACGGTGATC
TCATTCGAGAGCATGAGCAAGGATCCGGTGGGTCTGCTCATGACGGTGAA
CAGCACTCCGTTGGAGCACGGACTGGGTATACTGTATGCCGCCCTTCTGC
TAATCGGTCTATATGCCATTATTATCTGGGAATTTTCGGACCGTATTCTA
AGCACTTTGCTCATAACAGCTATGTCCCTCGCCCTGCTCACCGTTTTGGG
GAGCAGGCCCACTCTGGAAACGATTGTGAGTTGGGTGGACTGGGAGACCA
TGATGCTCCTGCTGGGCAATATGATTATAACATCGCGCATGGCAGATACA
GGCTTCTTTGACTACCTGGCCGTGGTCGCCTATCGCATCTCCAAGGGCCA
TGCCTGGCTGCTGATCGGTCTTTTGGGATTCTTCGTGGGATTGACCTCGA
CTGTTGTGGACAATGCCACCGTGGTGCTTCTCTTCTGCCCACCCGTCATT
CGATTGTGCGAGGTAATGGACTTGAGGACCACCTTGGTGCTCATCATTGT
AGCAATCTATGCAAATATCGGTGGGTCCATTACCCCAGTGAGTGGGCCAC
CCAATACCATCATAGCGACCAATAAGATGGTGGAGTCCGCAGGTATTAAT
TTTGTTCGTTTCTCGCTACTCATGCTTCCGACTGCTTTGATTTGCCTGGC
GTCTACCTTTGGCCTAATCTACTGGACCATGGGTAAGAAGATCTACATTC
TGGACGAAGATCAGGTGAACCTAGCAGAGAAGCGGCGAGAAAATACCAGA
ACCTCTTTTGATATCCAGCTGAGGGTCGCCGAACTGCGAAGACAGCCAAG
GAGCAAGGTAATCCCTCCAGCTGAGAGCTACTTCATAACACTGGCAACCT
TGGAGGCGAGCAATTTTGTCCGCAAGAAGGTGCTGCTGGTGGAATCCCTT
CTGGCCCTGAGCTTTGCCGCCTTCTGCTTCATTCTGCAATCGGTTCCATG
GGCCATTCCCGGAGCCTCTCTGGGCTGGATATCAATTCTGTCCGCCTTTC
TGCTGCTCATCCTGATCGACCAGAAGGATATCATCAAGGTCATGGCCAGC
GTCGAGTGGGGCATCATGCTGCTGCTCGCTTCTCTCTTCATTTTCACCAT
GGTCGTCGATGAACTGGGCCTCATCCACTGGTTGGGCTCTCAGGTGGTGT
CTGTGATCCTCCGAGTGGACGAATCATACCAGACCATGGTCGGTATGCTC
CTGATCCTCTGGCTTTCGGCCCTGCTCTCCGCCTTTATTCACAATGCGGC
GGTGGCACCCATCATGGTGAAACTCTGCACTGACATGGTCGTATATGACC
AGGTCCAGATGCCCCTACTGCCGCTCATCTGGGCCACAAGCATGGGCACC
AGCTACGGTGCCAATGGCACTCTCTTGGGCTCCCTGGCCAACGAGTTCGC
CGCGGTGGTGGGCAAAGCTCATGGCTACAAGATCACCTTCAGGTCATTCT
TTGTGGTTGGTTTCCTAATCATGCTATTCACCGTTGTCATCTGCTCGATT
TTCCTAATTATTGCCCACTCAATTTTTGATTGGCATTAGAAGCTTTCTAG
ACCAT
BS29750.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:34:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13801-RA | 2073 | CG13801-PA | 1..2073 | 17..2089 | 10365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:34:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13801-RA | 2130 | CG13801-RA | 9..2083 | 16..2090 | 10375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:34:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2360565..2362639 | 16..2090 | 10375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:34:53 has no hits.
BS29750.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-18 13:50:56 Download gff for
BS29750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13801-RA | 10..2082 | 17..2089 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:26 Download gff for
BS29750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13801-RA | 10..2082 | 17..2089 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:47:08 Download gff for
BS29750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13801-RA | 10..2082 | 17..2089 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:47:08 Download gff for
BS29750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2360566..2362638 | 17..2089 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:26 Download gff for
BS29750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2360566..2362638 | 17..2089 | 100 | | Plus |
BS29750.pep Sequence
Translation from 16 to 2088
> BS29750.pep
MNPIIKKYRLRLRRTERDSTIGYVFRIIRIVILLSLWTGSTIILFLHKPE
ELATSMVTVMPNKTAFRNVKMKQDSVEIRLNGAINAYLTNHRVRTSNFSA
VGVRLEWRDRGMNRSLWRTGMWMVYMYKDKKKYLQVNRVFQFSISGWQQE
RSLIQRTLPTDRSLENSVYDWAFAQTVISFESMSKDPVGLLMTVNSTPLE
HGLGILYAALLLIGLYAIIIWEFSDRILSTLLITAMSLALLTVLGSRPTL
ETIVSWVDWETMMLLLGNMIITSRMADTGFFDYLAVVAYRISKGHAWLLI
GLLGFFVGLTSTVVDNATVVLLFCPPVIRLCEVMDLRTTLVLIIVAIYAN
IGGSITPVSGPPNTIIATNKMVESAGINFVRFSLLMLPTALICLASTFGL
IYWTMGKKIYILDEDQVNLAEKRRENTRTSFDIQLRVAELRRQPRSKVIP
PAESYFITLATLEASNFVRKKVLLVESLLALSFAAFCFILQSVPWAIPGA
SLGWISILSAFLLLILIDQKDIIKVMASVEWGIMLLLASLFIFTMVVDEL
GLIHWLGSQVVSVILRVDESYQTMVGMLLILWLSALLSAFIHNAAVAPIM
VKLCTDMVVYDQVQMPLLPLIWATSMGTSYGANGTLLGSLANEFAAVVGK
AHGYKITFRSFFVVGFLIMLFTVVICSIFLIIAHSIFDWH*
BS29750.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:04:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13801-PA | 690 | CG13801-PA | 1..690 | 1..690 | 3485 | 100 | Plus |
| CG11262-PA | 702 | CG11262-PA | 57..700 | 23..690 | 1449 | 43.5 | Plus |
| CG31693-PA | 688 | CG31693-PA | 49..683 | 24..690 | 1177 | 37.3 | Plus |
| CG31693-PB | 607 | CG31693-PB | 1..602 | 56..690 | 1131 | 37.5 | Plus |
| hoe1-PH | 658 | CG12787-PH | 122..658 | 175..690 | 1012 | 39.6 | Plus |
