BS29752.complete Sequence
1718 bp assembled on 2012-06-18
GenBank Submission: KX804109
> BS29752.complete
GAAGTTATCAGTCGACATGAATCCAAACGATACTTTATCAGCCTTCTCAC
TTCTCTTGTGCGTCCTGATTCTTTCCGCTGGACGCGGCGAATTACTTTTT
AATGCGGATGACAATGTGGTGCAGCTGGATTTTGCATCATTCGAGTCCGG
ACTTAGTGAACCAACGTCTGGGAAACTGGTGCAGTTCTTTAACGGATTCT
GCGAGGAGAGCCAGAACTTTATACCAGCGTTTAAGAATCTATCTCGTAAA
CTTTACAAGTGGCACCGATTACTCAAAGTCCATGTACTAGATTGTGGAAA
GGATGAGAACGATATGATATGTAGCATTTACAGCATTCGTAAAACGCCAA
CTCTGCGATATTTTCCACCGAGTTATAAGCTAGCACCAGACAACCTGGGT
ACCGAGATCACTCATCGAAATCCCAAAGAGATACAATCGAAGCTGGCCCT
AAATCTTCAAAAGCTTGATTACTTCAAAATGTTTAAGCGGCAGGACAATG
TGGCTCATATATTTCAAACGCACAAGGATATCGAGTACGTTGCTTTTGTT
TTCCAAATGTGTTTAGACCACTTTCTGCCGCACTTGGAAACGGGCAACTC
GATGGAGGAAAAGTATGCCTCTCAGGGCGATTGCAATGAGGATAATCCAA
TAGTTTCGTTGATCGGAAGAAATACCCTTCTTGAATTGCTGCCCTACAGG
AAAGTGGTTGTGCGGATCTTCGACAATCATGATGTTTACAACAAATTTGG
CATATCGCCCGTACCCAACTTAGTGGTTCTGGTAAATAAAGCTGGAAAAC
TGCTATTTCTCACACCCGAGATGGATAGCAGTAAGGCTTATGTGGCTGCC
ATTAAGCAATTCTTGATCTTTGTCGACCTTAAGCCCCAGAAACCGTTGCC
AAAAACCCCACCCGCCAACATAAGTGAAGCCTTAAGGTATGAGATATTCG
AGCAGCACAAGCATCATCCCTCTCGGATCTATCGAGCCGATCTGGAACGG
GCTATCGATCAAATCCTTAATGTAAAGTTCCCAGGAACTACGCACTTTGC
CGGAGCAAAGATAGTTGTTCTGCGAAATTTCGTTAAACTGATATACAACT
CAAGTCCCTTGAAGCCAGAGGCGCGGGAAAAGCTGGCAAACCTCTATTAT
TCCCTGCACGTGAAAAAGCAACTTTCCGGAGTGGGATTCAAAAATTTGCT
GCTAAAATCAGTAAAGGATTACGTGTTTGATGGAAAGCAATATGTTGGTT
GTATTGCCTCTCGTCCTTCGTTGCGCGGCTTTAATTGCTCCCTTTGGGTT
CTATTCCATTATCTTAGTGTGGAGTCGAAAAAGCTTAAGCCCAAATCCGT
GTTGTTAGTATTTCTCGGATATGTACGATTCTTTATGAACTGCAAGGAGT
GTGATATGAAAATAAGCGAGTTCAAAAAGCTCCGACCAATTGCAAATGTG
ACCAATGATGATGAACAGATTTTGTGGCTCTGGGAAGCGCATAATTATGT
CAACAAACAGTTGGCCGGCGATTCTACAGAGGATCCGAAATTCCCAAAGA
TTCAGTTTCCAAGCGAAAGAGATTGTCCCAAGTGTAGAAACAACGCGACC
GAATGGCGCACCGAAGAAGTATTGCACTATCTGAAAGGCATATATACCTT
AAAAAACCTTAGTTGGTTCGGAATGTCATCCGGAAAACATGCAATTGAAT
AAAAGCTTTCTAGACCAT
BS29752.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:34:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31413-RA | 1686 | CG31413-PA | 1..1686 | 17..1702 | 8430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:35:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31413-RA | 1782 | CG31413-RA | 30..1716 | 17..1703 | 8435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:34:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23702790..23704476 | 17..1703 | 8435 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 11:34:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 2027..2105 | 517..440 | 113 | 63.7 | Minus |
BS29752.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-18 13:50:58 Download gff for
BS29752.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31413-RA | 30..1713 | 17..1700 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:28 Download gff for
BS29752.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31413-RA | 30..1713 | 17..1700 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:47:09 Download gff for
BS29752.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31413-RA | 30..1713 | 17..1700 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:47:09 Download gff for
BS29752.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23702790..23704473 | 17..1700 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:28 Download gff for
BS29752.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19528512..19530195 | 17..1700 | 100 | | Plus |
BS29752.pep Sequence
Translation from 16 to 1701
> BS29752.pep
MNPNDTLSAFSLLLCVLILSAGRGELLFNADDNVVQLDFASFESGLSEPT
SGKLVQFFNGFCEESQNFIPAFKNLSRKLYKWHRLLKVHVLDCGKDENDM
ICSIYSIRKTPTLRYFPPSYKLAPDNLGTEITHRNPKEIQSKLALNLQKL
DYFKMFKRQDNVAHIFQTHKDIEYVAFVFQMCLDHFLPHLETGNSMEEKY
ASQGDCNEDNPIVSLIGRNTLLELLPYRKVVVRIFDNHDVYNKFGISPVP
NLVVLVNKAGKLLFLTPEMDSSKAYVAAIKQFLIFVDLKPQKPLPKTPPA
NISEALRYEIFEQHKHHPSRIYRADLERAIDQILNVKFPGTTHFAGAKIV
VLRNFVKLIYNSSPLKPEAREKLANLYYSLHVKKQLSGVGFKNLLLKSVK
DYVFDGKQYVGCIASRPSLRGFNCSLWVLFHYLSVESKKLKPKSVLLVFL
GYVRFFMNCKECDMKISEFKKLRPIANVTNDDEQILWLWEAHNYVNKQLA
GDSTEDPKFPKIQFPSERDCPKCRNNATEWRTEEVLHYLKGIYTLKNLSW
FGMSSGKHAIE*
BS29752.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:04:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31413-PA | 561 | CG31413-PA | 1..561 | 1..561 | 2967 | 100 | Plus |
| CG17843-PA | 552 | CG17843-PA | 7..545 | 11..553 | 970 | 37.9 | Plus |
| CG6690-PA | 562 | CG6690-PA | 35..540 | 27..549 | 803 | 34 | Plus |
| CG4670-PB | 637 | CG4670-PB | 44..570 | 27..553 | 625 | 28.2 | Plus |
| CG4670-PA | 637 | CG4670-PA | 44..570 | 27..553 | 625 | 28.2 | Plus |
