BS29757.complete Sequence
716 bp assembled on 2012-05-24
GenBank Submission: KX806480
> BS29757.complete
GAAGTTATCAGTCGACATGTTTCTGTCCATCGCCCCGCCCCTAATGGACT
TCGAGGACGAGCTGCTCTGGATAAACCAGTCGAACAGCGACAAGGTGGAG
ATCATCTACGACAAGTCCAACTACATTACCCCCAACATAAAGCACCTCAT
CGAGCAGGCTTTTCTCCAGCCACTCAGCCTCCAGAACCAGCACATCCTCT
TCGACGACCTGCTGAAGCAGAACACGGACATTGCGCGCCAATATGGACTG
ACCCCGGACAAGCTACCTCTGCTCGTGGAAAGCAATCCTCTCATCTCCAT
TGAGATCTTGCTAAGACTGATGACGACCTCCGACATAACTGAATACTTCA
ACGTGTTGGTCAACATGGACATAACACTTCACTCCATGGAGGTGGTCAAC
CGACTAACCACCTCCGGACCTTTGCCCACTGAGTTTATTCACCTATACAT
CAGCAATTGCATCTCGACTTGCGAAACAGTCAAGGACAAGTACATGCAGT
CTCGCCTGGTGCGACTCGTTTGCGTATTTCTGCAGTCCTTGATTAGGAAC
AAGATTGTGAACGTTAGGGAACTATTCATTGAAATCGAAGCCTTCTGCGT
GGGTTTCAGCAAAATCAAGGAGGCTGCTACCCTGTACCGGCTTATCAAAC
ACTTGGAAACTGGGGAAAGCGCTCTGTCGTCCAACTCCCTAGCTAAGTAG
AAGCTTTCTAGACCAT
BS29757.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:24:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Not11-RC | 684 | CG13567-PC | 1..684 | 17..700 | 3420 | 100 | Plus |
Not11-RB | 684 | CG13567-PB | 1..684 | 17..700 | 3420 | 100 | Plus |
Not11-RA | 744 | CG13567-PA | 1..553 | 17..569 | 2765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:24:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Not11-RC | 1022 | CG13567-RC | 275..959 | 16..700 | 3425 | 100 | Plus |
Not11-RB | 815 | CG13567-RB | 68..752 | 16..700 | 3425 | 100 | Plus |
Not11-RA | 875 | CG13567-RA | 68..621 | 16..569 | 2770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:24:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24037395..24037641 | 262..16 | 1235 | 100 | Minus |
2R | 25286936 | 2R | 24036974..24037141 | 569..402 | 840 | 100 | Minus |
2R | 25286936 | 2R | 24037201..24037342 | 402..261 | 710 | 100 | Minus |
2R | 25286936 | 2R | 24036783..24036915 | 700..568 | 665 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:24:29 has no hits.
BS29757.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:24 Download gff for
BS29757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13567-RB | 166..843 | 23..700 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:08 Download gff for
BS29757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13567-RB | 75..752 | 23..700 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:23 Download gff for
BS29757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Not11-RB | 75..752 | 23..700 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:23 Download gff for
BS29757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24036783..24036914 | 569..700 | 100 | <- | Minus |
2R | 24036975..24037140 | 403..568 | 100 | <- | Minus |
2R | 24037201..24037340 | 263..402 | 100 | <- | Minus |
2R | 24037395..24037634 | 23..262 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:08 Download gff for
BS29757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19924306..19924437 | 569..700 | 100 | <- | Minus |
arm_2R | 19924498..19924663 | 403..568 | 100 | <- | Minus |
arm_2R | 19924724..19924863 | 263..402 | 100 | <- | Minus |
arm_2R | 19924918..19925157 | 23..262 | 100 | | Minus |
BS29757.pep Sequence
Translation from 16 to 699
> BS29757.pep
MFLSIAPPLMDFEDELLWINQSNSDKVEIIYDKSNYITPNIKHLIEQAFL
QPLSLQNQHILFDDLLKQNTDIARQYGLTPDKLPLLVESNPLISIEILLR
LMTTSDITEYFNVLVNMDITLHSMEVVNRLTTSGPLPTEFIHLYISNCIS
TCETVKDKYMQSRLVRLVCVFLQSLIRNKIVNVRELFIEIEAFCVGFSKI
KEAATLYRLIKHLETGESALSSNSLAK*
BS29757.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Not11-PC | 227 | CG13567-PC | 1..227 | 1..227 | 1146 | 100 | Plus |
Not11-PB | 227 | CG13567-PB | 1..227 | 1..227 | 1146 | 100 | Plus |
Not11-PA | 247 | CG13567-PA | 1..247 | 1..227 | 1115 | 91.9 | Plus |