BS29759.complete Sequence
1094 bp assembled on 2012-05-24
GenBank Submission: KX805141
> BS29759.complete
GAAGTTATCAGTCGACATGGAGTGCTGTTTATCGGAGGAGGCCAAGGAAC
AAAAGCGCATCAATCAGGAAATCGAGAAGCAGTTGCGCCGGGACAAGAGA
GATGCGCGCCGCGAGCTTAAACTGCTACTACTGGGCACTGGCGAGTCCGG
GAAGTCCACATTCATCAAACAGATGCGTATTATCCACGGCAGCGGTTACT
CGGACGAGGACAAGCGTGGGTACATCAAGCTGGTTTTTCAGAACATATTC
ATGGCCATGCAGTCAATGATCAAGGCCATGGATATGCTGAAGATTTCCTA
CGGCCAGGGAGAGCATAGTGAACTGGCCGATCTGGTGATGAGCATCGATT
ATGAGACCGTTACCACGTTCGAGGATCCATACTTGAATGCCATCAAAACG
CTTTGGGACGATGCTGGCATCCAGGAGTGCTATGATCGTCGTAGGGAATA
TCAGCTGACTGATTCAGCCAAATACTACTTGAGCGATCTAGCTCGAATTG
AACAGGCTGATTACTTGCCAACCGAGCAGGATATTCTGCGTGCTCGAGTG
CCGACAACTGGCATTCTTGAGTATCCATTCGATTTGGATGGCATTGTGTT
TAGAATGGTAGACGTCGGTGGTCAGCGATCCGAGAGAAGAAAGTGGATTC
ATTGCTTTGAGAATGTGACATCAATTATATTTTTGGTAGCGCTATCGGAG
TACGATCAAATCTTGTTTGAATCTGATAATGAGAATCGAATGGAGGAATC
TAAAGCTTTATTTCGTACTATAATTACATACCCTTGGTTTCAAAATTCGT
CAGTTATTCTTTTCCTGAATAAGAAGGACTTGTTGGAAGAGAAAATAATG
TATTCGCATTTGGTAGACTATTTTCCTGAATACGATGGTCCAAAACAGGA
TCACGCTGCGGCCAAACAGTTCGTTCTGAAAAAGTACTTGGCCTGCAATC
CAGATCCCGAACGTCAATGCTATTCGCATTTCACAACGGCCACAGATACC
GAAAACATCAAACTTGTGTTCTGCGCTGTCAAAGATACAATTATGCAAAA
TGCACTTAAGGAATTCAATTTGGGCTAAAAGCTTTCTAGACCAT
BS29759.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:24:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphaq-RD | 1062 | CG17759-PD | 1..1062 | 17..1078 | 5310 | 100 | Plus |
| Galphaq-RK | 1062 | CG17759-PK | 1..875 | 17..891 | 3730 | 95.1 | Plus |
| Galphaq-RE | 1062 | CG17759-PE | 1..875 | 17..891 | 3730 | 95.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:24:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphaq-RD | 1615 | CG17759-RD | 433..1495 | 16..1078 | 5315 | 100 | Plus |
| CG45086-RB | 3050 | CG45086-RB | 1314..2189 | 16..891 | 3735 | 95.1 | Plus |
| CG45086-RA | 3017 | CG45086-RA | 1281..2156 | 16..891 | 3735 | 95.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:24:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12616539..12616725 | 134..320 | 935 | 100 | Plus |
| 2R | 25286936 | 2R | 12623908..12624087 | 141..320 | 870 | 98.9 | Plus |
| 2R | 25286936 | 2R | 12617985..12618142 | 732..889 | 790 | 100 | Plus |
| 2R | 25286936 | 2R | 12616787..12616941 | 320..474 | 775 | 100 | Plus |
| 2R | 25286936 | 2R | 12624149..12624294 | 320..465 | 700 | 98.6 | Plus |
| 2R | 25286936 | 2R | 12617793..12617924 | 602..733 | 660 | 100 | Plus |
| 2R | 25286936 | 2R | 12617456..12617584 | 475..603 | 645 | 100 | Plus |
| 2R | 25286936 | 2R | 12616296..12616415 | 16..135 | 600 | 100 | Plus |
| 2R | 25286936 | 2R | 12618203..12618311 | 887..995 | 545 | 100 | Plus |
| 2R | 25286936 | 2R | 12627238..12627383 | 321..466 | 460 | 87.7 | Plus |
| 2R | 25286936 | 2R | 12618777..12618863 | 992..1078 | 435 | 100 | Plus |
| 2R | 25286936 | 2R | 12624752..12624909 | 732..889 | 385 | 82.9 | Plus |
| 2R | 25286936 | 2R | 12627969..12628126 | 732..889 | 310 | 79.7 | Plus |
| 2R | 25286936 | 2R | 12627785..12627915 | 602..732 | 295 | 81.7 | Plus |
| 2R | 25286936 | 2R | 12624378..12624445 | 489..556 | 235 | 89.7 | Plus |
| 2R | 25286936 | 2R | 12624582..12624667 | 623..708 | 205 | 82.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:24:17 has no hits.
BS29759.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:22 Download gff for
BS29759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galpha49B-RD | 433..1492 | 17..1076 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:03 Download gff for
BS29759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphaq-RD | 434..1493 | 17..1076 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:18 Download gff for
BS29759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphaq-RD | 434..1493 | 17..1076 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:18 Download gff for
BS29759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12616297..12616414 | 17..134 | 100 | -> | Plus |
| 2R | 12616540..12616724 | 135..319 | 100 | -> | Plus |
| 2R | 12616787..12616941 | 320..474 | 100 | -> | Plus |
| 2R | 12617456..12617584 | 475..603 | 100 | -> | Plus |
| 2R | 12617795..12617924 | 604..733 | 100 | -> | Plus |
| 2R | 12617987..12618140 | 734..887 | 100 | -> | Plus |
| 2R | 12618204..12618311 | 888..995 | 100 | -> | Plus |
| 2R | 12618781..12618861 | 996..1076 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:03 Download gff for
BS29759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8506286..8506366 | 996..1076 | 100 | | Plus |
| arm_2R | 8503802..8503919 | 17..134 | 100 | -> | Plus |
| arm_2R | 8504045..8504229 | 135..319 | 100 | -> | Plus |
| arm_2R | 8504292..8504446 | 320..474 | 100 | -> | Plus |
| arm_2R | 8504961..8505089 | 475..603 | 100 | -> | Plus |
| arm_2R | 8505300..8505429 | 604..733 | 100 | -> | Plus |
| arm_2R | 8505492..8505645 | 734..887 | 100 | -> | Plus |
| arm_2R | 8505709..8505816 | 888..995 | 100 | -> | Plus |
BS29759.pep Sequence
Translation from 16 to 1077
> BS29759.pep
MECCLSEEAKEQKRINQEIEKQLRRDKRDARRELKLLLLGTGESGKSTFI
KQMRIIHGSGYSDEDKRGYIKLVFQNIFMAMQSMIKAMDMLKISYGQGEH
SELADLVMSIDYETVTTFEDPYLNAIKTLWDDAGIQECYDRRREYQLTDS
AKYYLSDLARIEQADYLPTEQDILRARVPTTGILEYPFDLDGIVFRMVDV
GGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESDNENRMEESKALFR
TIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPKQDHAAAK
QFVLKKYLACNPDPERQCYSHFTTATDTENIKLVFCAVKDTIMQNALKEF
NLG*
BS29759.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphaq-PD | 353 | CG17759-PD | 1..353 | 1..353 | 1840 | 100 | Plus |
| Galphaq-PJ | 396 | CG17759-PJ | 1..396 | 1..353 | 1685 | 84.3 | Plus |
| Galphaq-PK | 353 | CG17759-PK | 1..352 | 1..352 | 1645 | 89.5 | Plus |
| Galphaq-PE | 353 | CG17759-PE | 1..352 | 1..352 | 1645 | 89.5 | Plus |
| Galphaq-PC | 353 | CG17759-PC | 1..352 | 1..352 | 1645 | 89.5 | Plus |
