BS29763.complete Sequence
1409 bp assembled on 2012-05-24
GenBank Submission: KX803626
> BS29763.complete
GAAGTTATCAGTCGACATGCAGAGACTGCAATTCGCTCTGCTAGCGTCGC
TGCTCCTGCTGGTGCTGCTTCTTCCGGGGATTAGGAGCACTCCCATCGAC
CAGGACGTCGACATTGTTCACTATCAGCCGGAGCAAGTGCATCTGTCCTT
TGGAGAACGCACCGATAGCGAGATAGTCGTCACTTGGTCCACGCGCAGCC
TGCCGCCGGATCAGGAAGTGGGTGCGGTCAGCGTGGTGGAGTACGGTCAA
CTGGTAGACGGACAGGTCAGGCTCACCCAACAGGCCCGGGGAAAGGCTAC
TAAATTCGTGGACGGCGGTCACAAGCAGGCCACGCAGTTCATCCACAGGG
TGACGCTTAGGGACCTGGAGCCAAATGCCACATACTCTTACCATTGCGGT
AGCGATTTTGGCTGGTCGGCCATCTTCCAGTTTCGCACAGTGCCCTCGGC
ATCCGTTGACTGGTCGCCATCGCTGGCTATCTACGGGGATATGGGCAATG
AGAATGCCCAATCCCTGGCCCGATTGCAGCAGGAGACGCAGCGCGGCATG
TACGATGCCATCATCCATGTGGGTGACTTCGCCTACGACATGAACACGAA
GAATGCTCGCGTGGGGGATGAGTTTATGCGGCAGATCGAAACGGTGGCTG
CCTACCTGCCATACATGGTGGTTCCCGGCAATCACGAGGAGAAGTTCAAC
TTCTCGAACTATCGTGCCCGCTTCAGTATGCCGGGAGGTACGGAGAACAT
GTTCTACAGCTTCGATCTGGGACCCGTGCACTTCGTGGGCATTAGCACGG
AGGTCTACTACTTTCTCAACTATGGTTTAAAGCCGCTGGTATTCCAGTTC
GAATGGTTGCGTGAGGATCTGGCCAAGGCCAATCTGCCAGAGAATCGGAA
CAAGCGTCCGTGGATCATCTTGTACGGTCATCGACCCATGTACTGCAGCA
ACGAGAACGACAATGACTGCACCCACTCAGAGACTCTCACGCGGGTGGGC
TGGCCATTTGTACACATGTTCGGATTGGAGCCGCTGCTTTACGAGTTCGG
CGTGGACGTGGCCATTTGGGCGCACGAGCACTCCTACGAGAGACTCTGGC
CCATTTACGATTACAAGGTGCGCAATGGAACGCTGAAGGATTCGCCGTAC
AATGATCCTAGTGCCCCTGTGCACATCGTCACAGGATCCGCCGGCTGCAA
GGAGGGAAGAGAACCATTCAAGGGCAAAATACCCGAATGGAGCGCTTTTC
ACAGCCAGGACTATGGTTACACACGGCTCAAGGCTCACAATCGAACACAT
ATCCATTTCGAGCAGGTGTCCGACGACAAGAACGGCGCCATCATCGATGA
CTTTTGGTTGGTGAAATCCAAGCATGGAAGCTACCGAAACTAAAAGCTTT
CTAGACCAT
BS29763.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:24:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1637-RB | 1377 | CG1637-PB | 1..1377 | 17..1393 | 6885 | 100 | Plus |
| CG1637-RD | 1380 | CG1637-PD | 1..1380 | 17..1393 | 6820 | 99.8 | Plus |
| CG1637-RC | 1353 | CG1637-PC | 415..908 | 461..954 | 1015 | 80.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:24:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1637-RB | 2196 | CG1637-RB | 246..1623 | 17..1394 | 6890 | 100 | Plus |
| CG1637-RD | 2199 | CG1637-RD | 246..1626 | 17..1394 | 6825 | 99.8 | Plus |
| CG1637-RC | 1708 | CG1637-RC | 660..1153 | 461..954 | 1015 | 80.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:24:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10874473..10875170 | 1394..697 | 3490 | 100 | Minus |
| X | 23542271 | X | 10875241..10875588 | 696..349 | 1740 | 100 | Minus |
| X | 23542271 | X | 10875801..10875998 | 351..154 | 990 | 100 | Minus |
| X | 23542271 | X | 10877415..10877553 | 155..17 | 695 | 100 | Minus |
| X | 23542271 | X | 10871530..10871764 | 695..461 | 560 | 82.6 | Minus |
| X | 23542271 | X | 10871208..10871465 | 954..697 | 465 | 78.7 | Minus |
| X | 23542271 | X | 10873137..10873374 | 695..458 | 320 | 75.6 | Minus |
| X | 23542271 | X | 10872377..10873030 | 1378..722 | 310 | 70.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:24:38 has no hits.
BS29763.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:26 Download gff for
BS29763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1637-RB | 255..1629 | 17..1391 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:12 Download gff for
BS29763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1637-RB | 246..1620 | 17..1391 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:26 Download gff for
BS29763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1637-RB | 246..1620 | 17..1391 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:26 Download gff for
BS29763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10874476..10875170 | 697..1391 | 100 | <- | Minus |
| X | 10875241..10875587 | 350..696 | 100 | <- | Minus |
| X | 10875803..10875996 | 156..349 | 100 | <- | Minus |
| X | 10877415..10877553 | 17..155 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:12 Download gff for
BS29763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10768509..10769203 | 697..1391 | 100 | <- | Minus |
| arm_X | 10769274..10769620 | 350..696 | 100 | <- | Minus |
| arm_X | 10769836..10770029 | 156..349 | 100 | <- | Minus |
| arm_X | 10771448..10771586 | 17..155 | 100 | | Minus |
BS29763.pep Sequence
Translation from 16 to 1392
> BS29763.pep
MQRLQFALLASLLLLVLLLPGIRSTPIDQDVDIVHYQPEQVHLSFGERTD
SEIVVTWSTRSLPPDQEVGAVSVVEYGQLVDGQVRLTQQARGKATKFVDG
GHKQATQFIHRVTLRDLEPNATYSYHCGSDFGWSAIFQFRTVPSASVDWS
PSLAIYGDMGNENAQSLARLQQETQRGMYDAIIHVGDFAYDMNTKNARVG
DEFMRQIETVAAYLPYMVVPGNHEEKFNFSNYRARFSMPGGTENMFYSFD
LGPVHFVGISTEVYYFLNYGLKPLVFQFEWLREDLAKANLPENRNKRPWI
ILYGHRPMYCSNENDNDCTHSETLTRVGWPFVHMFGLEPLLYEFGVDVAI
WAHEHSYERLWPIYDYKVRNGTLKDSPYNDPSAPVHIVTGSAGCKEGREP
FKGKIPEWSAFHSQDYGYTRLKAHNRTHIHFEQVSDDKNGAIIDDFWLVK
SKHGSYRN*
BS29763.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1637-PB | 458 | CG1637-PB | 1..458 | 1..458 | 2479 | 100 | Plus |
| CG1637-PD | 459 | CG1637-PD | 1..459 | 1..458 | 2467 | 99.8 | Plus |
| CG1637-PC | 450 | CG1637-PC | 1..446 | 1..456 | 1659 | 68.4 | Plus |
| CG1637-PE | 453 | CG1637-PE | 1..446 | 1..458 | 1659 | 67.2 | Plus |
| CG1637-PA | 453 | CG1637-PA | 1..446 | 1..458 | 1659 | 67.2 | Plus |
