BS29766.complete Sequence
443 bp assembled on 2012-05-24
GenBank Submission: KX803989
> BS29766.complete
GAAGTTATCAGTCGACATGTGTTGTAAGTCGTGCGAAGAACAACCAGCAT
CATGCTGCTCGACTTTCTATGCATTTTTCTGCATGGGAGCAGGATTCTTT
ATGTTTAGCTTCTCGCTGCACAATGTAATTATATCAGAAGAGTCTATTAC
CATTATGGATTGGTTTCTGCACATACATGGCACTGATTTGACGGAAAAAC
AGCTTTTGATATTGTACGCTTCGGATTTAATTTTTGCCTTTACGTATGTC
CTCGCAGGAGTTTTGCTAGCTTGGGGAATCAAAAGCAAAACAAAGGGATT
TATTAAAGCTGGAAAGATCTTAAGCTATTTCTTTCCCATATATAATATTG
TTTATGTATTTCCATTAGTTATACATATTGGCTGTGTGATAAAATTATGC
AGATATCTAAAGGAAAACTTTGATTAGAAGCTTTCTAGACCAT
BS29766.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:24:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32192-RB | 411 | CG32192-PB | 1..411 | 17..427 | 2055 | 100 | Plus |
| CG32192-RC | 402 | CG32192-PC | 1..402 | 17..427 | 1885 | 97.8 | Plus |
| CG42393-RA | 408 | CG42393-PA | 289..407 | 308..426 | 235 | 79.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:24:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32192-RB | 992 | CG32192-RB | 104..515 | 17..428 | 2060 | 100 | Plus |
| CG32192-RC | 983 | CG32192-RC | 104..506 | 17..428 | 1890 | 97.8 | Plus |
| CG42393-RA | 1142 | CG42393-RA | 400..518 | 308..426 | 235 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:24:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18040420..18040689 | 17..286 | 1350 | 100 | Plus |
| 3L | 28110227 | 3L | 18040763..18040844 | 287..368 | 410 | 100 | Plus |
| 3L | 28110227 | 3L | 18040925..18040987 | 366..428 | 315 | 100 | Plus |
| 3L | 28110227 | 3L | 18043207..18043266 | 308..367 | 195 | 88.3 | Plus |
Blast to na_te.dros performed 2014-11-28 11:24:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsil\Loa | 7779 | Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). | 7419..7474 | 354..300 | 106 | 67.9 | Minus |
| blood | 7410 | blood BLOOD 7410bp | 1858..1908 | 388..337 | 104 | 69.2 | Minus |
BS29766.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:28 Download gff for
BS29766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32192-RB | 104..514 | 17..427 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:14 Download gff for
BS29766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32192-RB | 104..514 | 17..427 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:31 Download gff for
BS29766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32192-RB | 104..514 | 17..427 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:31 Download gff for
BS29766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18040420..18040689 | 17..286 | 100 | -> | Plus |
| 3L | 18040763..18040844 | 287..368 | 100 | -> | Plus |
| 3L | 18040928..18040986 | 369..427 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:14 Download gff for
BS29766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18033520..18033789 | 17..286 | 100 | -> | Plus |
| arm_3L | 18033863..18033944 | 287..368 | 100 | -> | Plus |
| arm_3L | 18034028..18034086 | 369..427 | 100 | | Plus |
BS29766.pep Sequence
Translation from 16 to 426
> BS29766.pep
MCCKSCEEQPASCCSTFYAFFCMGAGFFMFSFSLHNVIISEESITIMDWF
LHIHGTDLTEKQLLILYASDLIFAFTYVLAGVLLAWGIKSKTKGFIKAGK
ILSYFFPIYNIVYVFPLVIHIGCVIKLCRYLKENFD*
BS29766.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32192-PB | 136 | CG32192-PB | 1..136 | 1..136 | 732 | 100 | Plus |
| CG32192-PC | 133 | CG32192-PC | 1..133 | 1..136 | 703 | 97.8 | Plus |
| CG42393-PA | 135 | CG42393-PA | 2..135 | 3..136 | 472 | 61.2 | Plus |
