Clone BS29768 Report

Search the DGRC for BS29768

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:297
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG32806-RA
Protein status:BS29768.pep: full length peptide match
Sequenced Size:650

Clone Sequence Records

BS29768.complete Sequence

650 bp assembled on 2012-05-24

GenBank Submission: KX803511

> BS29768.complete
GAAGTTATCAGTCGACATGTGGATGCAATTAGGCTGTCGCGGGCTTGCAA
AAAGCCCCAGGCGAAAAGATGAAGACATTGAGCCACAATCTATTATTGCC
AGTGCATACAGGCACGAATACATATACAACACATATTTGGCTAAGAATAC
TTTTCAATTACCATCGGGCACAGATAGCGTCTATCTCGCCAACCCTTCGA
TGAACGAGCTAATGCGAGCTATTCAAAGTGGCTCCTCAATGGACACATTT
AAGCGCGTCATAGTATCAATGATTGTCCCAATTCCCAGAACTTCCCAGCT
GCTGGCACAGGCGAACTCTCCTTGCTATCAAAATTTAAGACTTACCCCAA
ATGTAGTGCACCGAAGTCATTCTTTCGATCAGCCGCAAGTGGGAATGTCA
GTTCAACGACTGCCGAGAGTGCACTCGGAGGGCGATTTGTTGCAGCCCAG
GAGGTCGGTTTGTGATGAGATGATCTCTAGAGATGCTTTGCCAGCGCGTG
TGGCTCCTTCGGAAATGCCCACGAAGCCCCAGGAAGTGGCGACCGAGGAG
CCCAGTGTCCAGTGGAATGCATGCTATTGGATTGGCTTGGCACACTTGCT
AATGATAATTTCTTGCATGCGCGGACTCTTTTAAAAGCTTTCTAGACCAT

BS29768.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:24:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32806-RA 618 CG32806-PA 1..618 17..634 3090 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG32806-RA 803 CG32806-RA 101..719 17..635 3095 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:24:50
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1789730..1790334 31..635 3025 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:24:51 has no hits.

BS29768.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:28 Download gff for BS29768.complete
Subject Subject Range Query Range Percent Splice Strand
CG32806-RA 77..692 17..632 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:17 Download gff for BS29768.complete
Subject Subject Range Query Range Percent Splice Strand
CG32806-RA 101..716 17..632 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:33 Download gff for BS29768.complete
Subject Subject Range Query Range Percent Splice Strand
CG32806-RA 101..716 17..632 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:33 Download gff for BS29768.complete
Subject Subject Range Query Range Percent Splice Strand
X 1789730..1790331 31..632 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:17 Download gff for BS29768.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1683763..1684364 31..632 100   Plus

BS29768.pep Sequence

Translation from 16 to 633

> BS29768.pep
MWMQLGCRGLAKSPRRKDEDIEPQSIIASAYRHEYIYNTYLAKNTFQLPS
GTDSVYLANPSMNELMRAIQSGSSMDTFKRVIVSMIVPIPRTSQLLAQAN
SPCYQNLRLTPNVVHRSHSFDQPQVGMSVQRLPRVHSEGDLLQPRRSVCD
EMISRDALPARVAPSEMPTKPQEVATEEPSVQWNACYWIGLAHLLMIISC
MRGLF*

BS29768.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG32806-PA 205 CG32806-PA 1..205 1..205 1074 100 Plus