BS29769.complete Sequence
1190 bp assembled on 2012-05-24
GenBank Submission: KX804649
> BS29769.complete
GAAGTTATCAGTCGACATGCGGCTATTGGCCAGACACGCGATTCGATTGC
TGGGTCAGGAGAATAGCGCGGGCGAGGTGGCTTCACTTTCGAGAGGAGCA
ATCCGGCTGAAGGCCACAACCGGTTACCTCAATCTGGCCACGGCAAGTGT
TCAGCCATTGGAGCCGGAGAAACAGGTGCTGAGAAAGAATTCGCCACTCA
CGGACTCCTTTGGCCGGCATCACACCTATTTGAGAATTTCTCTAACCGAA
CGCTGCAATCTGCGATGCGACTACTGCATGCCCGCTGAAGGCGTTCCGCT
ACAGCCGAAAAACAAACTCCTGACCACCGAGGAAATCCTTCGTCTAGCTC
GAATTTTCGTGGAGCAGGGAGTGCGAAAGATCCGCTTGACCGGCGGAGAG
CCAACTGTGCGCAGGGATATCGTAGAGATAGTGGCACAAATGAAAGCACT
ACCCGAACTGGAGCAAATCGGAATTACCACCAATGGCCTGGTGCTGACAC
GCCTGCTGTTGCCGCTCCAGAGAGCTGGACTAGATAACCTGAACATCAGT
CTGGATACGCTGAAAAGGGATCGCTTTGAGAAGATCACCAGGCGAAAAGG
ATGGGAGCGGGTGATAGCCGGCATTGATTTAGCTGTCCAATTGGGCTATC
GCCCCAAGGTGAACTGCGTCCTTATGCGGGATTTCAACGAGGATGAAATC
TGTGATTTTGTTGAGTTCACCAGGAATCGTCCGGTAGATGTGCGGTTCAT
AGAGTACATGCCATTCTCCGGAAACAAGTGGCATACAGAGAGGCTCATTT
CGTATAAAGATACCCTGCAAATCATTCGACAAAGGTGGCCAGACTTCAAG
GCCCTTCCCAATGGACCTAATGACACTTCTAAAGCCTATGCAGTTCCGGG
ATTTAAGGGTCAGGTCGGTTTCATCACCTCCATGACGGAACACTTTTGTG
GTACCTGCAATAGATTGCGACTCACTGCGGATGGAAACATAAAGGTGTGC
TTGTTTGGCAACAAAGAGTTCTCGTTGAGAGATGCCATGCGAGATGAGAG
TGTTAGCGAGGAACAGTTGGTGGATCTCATTGGAGCAGCCGTCCAGCGTA
AGAAGAAACAGCATGCAGGCATGCTGAACCTGTCGCAGATGGAGAACCGG
CCCATGATACTCATTGGCGGCTAGAAGCTTTCTAGACCAT
BS29769.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:24:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mocs1-RA | 1158 | CG33048-PA | 1..1158 | 17..1174 | 5790 | 100 | Plus |
| Mocs1-RC | 1698 | CG33048-PC | 1..1102 | 17..1118 | 5510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:24:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mocs1-RA | 2232 | CG33048-RA | 250..1409 | 15..1174 | 5800 | 100 | Plus |
| Mocs1-RC | 2178 | CG33048-RC | 288..1391 | 15..1118 | 5520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:24:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11071559..11072411 | 267..1119 | 4265 | 100 | Plus |
| 3L | 28110227 | 3L | 11070813..11070985 | 15..187 | 865 | 100 | Plus |
| 3L | 28110227 | 3L | 11071049..11071130 | 186..267 | 410 | 100 | Plus |
| 3L | 28110227 | 3L | 11072466..11072525 | 1115..1174 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:24:55 has no hits.
BS29769.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:29 Download gff for
BS29769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mocs1-RB | 233..1390 | 17..1174 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:19 Download gff for
BS29769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mocs1-RA | 252..1409 | 17..1174 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:35 Download gff for
BS29769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mocs1-RA | 252..1409 | 17..1174 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:35 Download gff for
BS29769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11070815..11070985 | 17..187 | 100 | -> | Plus |
| 3L | 11071051..11071129 | 188..266 | 100 | -> | Plus |
| 3L | 11071559..11072410 | 267..1118 | 100 | -> | Plus |
| 3L | 11072470..11072525 | 1119..1174 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:19 Download gff for
BS29769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11063915..11064085 | 17..187 | 100 | -> | Plus |
| arm_3L | 11064151..11064229 | 188..266 | 100 | -> | Plus |
| arm_3L | 11064659..11065510 | 267..1118 | 100 | -> | Plus |
| arm_3L | 11065570..11065625 | 1119..1174 | 100 | | Plus |
BS29769.pep Sequence
Translation from 16 to 1173
> BS29769.pep
MRLLARHAIRLLGQENSAGEVASLSRGAIRLKATTGYLNLATASVQPLEP
EKQVLRKNSPLTDSFGRHHTYLRISLTERCNLRCDYCMPAEGVPLQPKNK
LLTTEEILRLARIFVEQGVRKIRLTGGEPTVRRDIVEIVAQMKALPELEQ
IGITTNGLVLTRLLLPLQRAGLDNLNISLDTLKRDRFEKITRRKGWERVI
AGIDLAVQLGYRPKVNCVLMRDFNEDEICDFVEFTRNRPVDVRFIEYMPF
SGNKWHTERLISYKDTLQIIRQRWPDFKALPNGPNDTSKAYAVPGFKGQV
GFITSMTEHFCGTCNRLRLTADGNIKVCLFGNKEFSLRDAMRDESVSEEQ
LVDLIGAAVQRKKKQHAGMLNLSQMENRPMILIGG*
BS29769.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mocs1-PA | 385 | CG33048-PA | 1..385 | 1..385 | 1986 | 100 | Plus |
| Mocs1-PC | 565 | CG33048-PC | 1..367 | 1..367 | 1895 | 100 | Plus |
