Clone BS29775 Report

Search the DGRC for BS29775

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:297
Well:75
Vector:pDNR-Dual
Associated Gene/Transcriptobst-H-RA
Protein status:BS29775.pep: full length peptide match
Sequenced Size:842

Clone Sequence Records

BS29775.complete Sequence

842 bp assembled on 2012-05-24

GenBank Submission: KX801231

> BS29775.complete
GAAGTTATCAGTCGACATGTCCAAATATCTGATACACCTGTGCCTGGTGC
TGCTCTGGAGCTCTCGGATAAATGCAGATCACTTTGACGAATGTGACGGG
ATGGACGATGGGGCATTTGTACAAAGTTGGGAGAGCTGCCAATCCTACGT
GTACTGCGAGGGTGAGGAATCCCTAAAGGGCGATTGCGAGGATGGTGAAT
ACTTTGATTCCGAGGCGGGAACCTGTGATATTGCGGCCAATGTGTCATGT
TTCCTGGACGAAGTCGATGAACCCTCGGACCCGGAACCGGAAACAGACGA
AGAAGAGGAGGAAATACCCGCGACACCAAGACCAACCGAACCACCGATTG
TGGAGACCCCAACCGAAGTGGATATCATAAATATTGCGCCCGTTGTAAGG
CCCAACTGTCCGATCAGCGATGATCCCGGCCAGGTTATATTCATGGCCAG
CAATAATTCATGCACCAACTATTATCTCTGCTATCACGGCCATGCCATGG
AAATGCACTGTGATAATGAGCTGTACTTTAATTCCCTCACCGGACAGTGC
GATTACCCAGATAAAGTTCAGTGTGCCTTCGAAGATCCGCGATCCCACAA
GTGCCTGCCACACATGACCGAGTTCTTTCCACATCCGGACAACTGCAATT
ACTTCTACTACTGCATCAAGGGCTTTCTGACCCTGCAACAGTGCCCCTTC
TACTACGGCTGGGACATAGAACGCCGGAGTTGTGTGCAGATAGGTGTGGC
GAAATGCTATGGAAACTCCAGAAGAATAGGTCGGAAAGCCCCATTGCCAC
CCAGAAAACAACTCATCAAGTCTTAAAAGCTTTCTAGACCAT

BS29775.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:25:00
Subject Length Description Subject Range Query Range Score Percent Strand
obst-H-RA 810 CG33983-PA 1..810 17..826 4050 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:25:01
Subject Length Description Subject Range Query Range Score Percent Strand
obst-H-RA 915 CG33983-RA 14..823 17..826 4050 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:24:58
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15528670..15529230 577..17 2805 100 Minus
3L 28110227 3L 15528357..15528605 826..578 1245 100 Minus
Blast to na_te.dros performed on 2014-11-28 11:24:59 has no hits.

BS29775.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:30 Download gff for BS29775.complete
Subject Subject Range Query Range Percent Splice Strand
obst-H-RA 14..821 17..824 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:22 Download gff for BS29775.complete
Subject Subject Range Query Range Percent Splice Strand
obst-H-RA 14..821 17..824 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:37 Download gff for BS29775.complete
Subject Subject Range Query Range Percent Splice Strand
obst-H-RA 14..821 17..824 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:37 Download gff for BS29775.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15528359..15528605 578..824 100 <- Minus
3L 15528670..15529230 17..577 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:22 Download gff for BS29775.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15521459..15521705 578..824 100 <- Minus
arm_3L 15521770..15522330 17..577 100   Minus

BS29775.pep Sequence

Translation from 16 to 825

> BS29775.pep
MSKYLIHLCLVLLWSSRINADHFDECDGMDDGAFVQSWESCQSYVYCEGE
ESLKGDCEDGEYFDSEAGTCDIAANVSCFLDEVDEPSDPEPETDEEEEEI
PATPRPTEPPIVETPTEVDIINIAPVVRPNCPISDDPGQVIFMASNNSCT
NYYLCYHGHAMEMHCDNELYFNSLTGQCDYPDKVQCAFEDPRSHKCLPHM
TEFFPHPDNCNYFYYCIKGFLTLQQCPFYYGWDIERRSCVQIGVAKCYGN
SRRIGRKAPLPPRKQLIKS*

BS29775.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:22
Subject Length Description Subject Range Query Range Score Percent Strand
obst-H-PA 269 CG33983-PA 1..269 1..269 1524 100 Plus
CG33985-PA 277 CG33985-PA 14..267 12..248 519 37.6 Plus
CG33986-PB 277 CG33986-PB 38..266 16..247 302 28.2 Plus
Muc68D-PB 1514 CG6004-PB 1313..1512 25..246 202 25.2 Plus
CG33263-PA 227 CG33263-PA 4..222 3..186 178 25.1 Plus
Muc68D-PB 1514 CG6004-PB 1266..1432 86..239 155 26.3 Plus