BS29778.complete Sequence
761 bp assembled on 2012-05-24
GenBank Submission: KX803550
> BS29778.complete
GAAGTTATCAGTCGACATGCTAAAGGGTAGCACACTGAAAGCCCTGGACG
TCAGAATCCTATGGCCCCTTATTGAAACAAGGTCAGCAGGTAAATGTAAA
TTACATAACCCGAGGCCGACTCCAAACCGTAACATTGCGGCAGCAAAATT
GATCGTGACACTCAGATTGCTCTTATCCTGTTGCAGTGGAGGACACCAGC
GCAGCTTCTCCAGCAGCACCCACCGGTCCTACATAACATTCAATGATTTC
CGCAAAAAACACCGCTGGTACACAAAAAAGGAGCTTGTGGGCTACTCCAT
GCAGGACATGTACAGCGTGGTTTCCGACGTCAGCAATTACCACAAGTTCG
TGCCGTATGTGAAGCGCTCCGATGTGCACAGCCGGGGAAGTGAGGGCTTC
AAGGCGGACCTCATTGTTGGCTTTCCGCCGCTTAACGAGGCCTACACCTC
GCAGGTGACCCTGGTGCCGCCCAGCTTGGTTAAGTCAGAGTGCCACGATG
GACGTCTGTTCAACTACCTCCTGAATGAGTGGTCTTTTAAGCCGGGCCTC
AAGGACATACCTAACTCCTGCGTGCTGGACTTCAAGGTATCGTTCGAGTT
CAAGTCCCTCCTGCACAGCAACGTCGCCAACATATTTTTTGACCTTATCT
GCGATCAAATGGAAAACGCTTTTATCCAGGAGGTCCGTCGACGGAGTGGT
CCGCCCTCAATCCGCTCCCACGTGCTTACTTCGGATCGGTCCTGAAAGCT
TTCTAGACCAT
BS29778.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:25:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9410-RB | 729 | CG9410-PB | 1..729 | 17..745 | 3645 | 100 | Plus |
CG9410-RA | 624 | CG9410-PA | 64..624 | 185..745 | 2805 | 100 | Plus |
CG9410-RE | 123 | CG9410-PE | 1..73 | 17..89 | 365 | 100 | Plus |
CG9410-RA | 624 | CG9410-PA | 1..65 | 17..81 | 325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:25:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9410-RB | 930 | CG9410-RB | 71..799 | 17..745 | 3645 | 100 | Plus |
CG9410-RE | 833 | CG9410-RE | 140..702 | 183..745 | 2815 | 100 | Plus |
CG9410-RA | 891 | CG9410-RA | 200..760 | 185..745 | 2805 | 100 | Plus |
CG9410-RE | 833 | CG9410-RE | 71..143 | 17..89 | 365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:25:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6669491..6669945 | 291..745 | 2275 | 100 | Plus |
2R | 25286936 | 2R | 6669160..6669434 | 17..291 | 1375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:25:10 has no hits.
BS29778.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:32 Download gff for
BS29778.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9410-RD | 583..1310 | 17..744 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:28 Download gff for
BS29778.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9410-RB | 71..798 | 17..744 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:43 Download gff for
BS29778.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9410-RB | 71..798 | 17..744 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:43 Download gff for
BS29778.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6669160..6669434 | 17..291 | 100 | -> | Plus |
2R | 6669492..6669944 | 292..744 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:28 Download gff for
BS29778.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2556665..2556939 | 17..291 | 100 | -> | Plus |
arm_2R | 2556997..2557449 | 292..744 | 100 | | Plus |
BS29778.pep Sequence
Translation from 16 to 744
> BS29778.pep
MLKGSTLKALDVRILWPLIETRSAGKCKLHNPRPTPNRNIAAAKLIVTLR
LLLSCCSGGHQRSFSSSTHRSYITFNDFRKKHRWYTKKELVGYSMQDMYS
VVSDVSNYHKFVPYVKRSDVHSRGSEGFKADLIVGFPPLNEAYTSQVTLV
PPSLVKSECHDGRLFNYLLNEWSFKPGLKDIPNSCVLDFKVSFEFKSLLH
SNVANIFFDLICDQMENAFIQEVRRRSGPPSIRSHVLTSDRS*
BS29778.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9410-PB | 242 | CG9410-PB | 1..242 | 1..242 | 1278 | 100 | Plus |
CG9410-PA | 207 | CG9410-PA | 1..207 | 1..242 | 1047 | 85.5 | Plus |