BS29779.complete Sequence
491 bp assembled on 2012-05-24
GenBank Submission: KX802940
> BS29779.complete
GAAGTTATCAGTCGACATGTCGCTCGTCATCCCAGAGAAGTTCCAGCACA
TCCTGCGTATCATGAATACGAACATCGACGGCAAGCGCAAGGTTGGCATC
GCCATGACCGCCATCAAGGGAGTGGGTCGCCGCTACTCCAACATTGTGCT
GAAGAAGGCCGATGTCGATCTTACCAAGCGCGCCGGTGAGTGCACCGAGG
AGGAGGTCGACAAGGTGGTGACCATCATCTCGAACCCTCTGCAGTACAAG
GTGCCCAACTGGTTCCTCAACAGGCAGAAGGACATCATCGATGGCAAGTA
CTGGCAGCTGACCTCCTCCAACTTGGACTCGAAGCTGCGTGACGATCTGG
AGCGTCTGAAGAAGATCCGCTCCCACCGTGGTCTGCGTCACTACTGGGGC
CTCCGTGTGCGTGGCCAGCACACCAAGACCACCGGTCGTCGTGGTCGCAC
CGTGGGTGTGTCCAAGAAGAAGTAAAAGCTTTCTAGACCAT
BS29779.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:25:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS18-RA | 459 | CG8900-PA | 1..459 | 17..475 | 2295 | 100 | Plus |
| RpS18-RB | 459 | CG8900-PB | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:25:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS18-RA | 583 | CG8900-RA | 39..497 | 17..475 | 2295 | 100 | Plus |
| RpS18-RB | 606 | CG8900-RB | 62..520 | 17..475 | 2295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20264491..20264762 | 204..475 | 1360 | 100 | Plus |
| 2R | 25286936 | 2R | 20264246..20264434 | 19..207 | 945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:25:14 has no hits.
BS29779.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:33 Download gff for
BS29779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS18-RA | 87..543 | 17..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:30 Download gff for
BS29779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS18-RB | 62..518 | 17..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:44 Download gff for
BS29779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS18-RB | 62..518 | 17..473 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:44 Download gff for
BS29779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20264245..20264432 | 17..205 | 99 | -> | Plus |
| 2R | 20264493..20264760 | 206..473 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:30 Download gff for
BS29779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16151750..16151937 | 17..205 | 99 | -> | Plus |
| arm_2R | 16151998..16152265 | 206..473 | 100 | | Plus |
BS29779.pep Sequence
Translation from 16 to 474
> BS29779.pep
MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADV
DLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTS
SNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSK
KK*
BS29779.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS18-PA | 152 | CG8900-PA | 1..152 | 1..152 | 789 | 100 | Plus |
| RpS18-PB | 152 | CG8900-PB | 1..152 | 1..152 | 789 | 100 | Plus |
