BS29782.complete Sequence
824 bp assembled on 2012-07-26
GenBank Submission: KX805610
> BS29782.complete
GAAGTTATCAGTCGACATGAAAAACCAAAACCTTCGCTGCATCGTAACCG
ATTGTTATAAGAGTGGTCAACAGGATAGTAGCTCCATGTACAAGTTCCCC
ATAAATCCGGTTGTCCGGCAGAAGTGGTTGGATAATATTGCGGACATAAA
AGATATTAACTTGTTCAATAGTCGGGTGTGTAGGCGGCACTTTGAGACAC
AATGTTTTGGCAAGACCAAGGTGTTTTCCTGGGCAGTTCCCACACTTTTC
TTGAATACAAAAGAGGTAGTGCACCAGGTCAGTAAGCCAAGCAGGAACTC
CTTCATTCGCAGATGCAGCGTCAGGAACTGCTCCTCACGATCTCCTCCAG
AACGACTGCACTTCTTTCCCTCGAATCCCGAAATGCGCAAGGCATGGATG
GAAATATGTCGGCTTACGGTGGACAACAAGTGGCTGTTTATTTGCGGCAG
ACACTTTCGCCGGACTTATCTGCCAAACAAGGGAAACCTTAGAAAGGACG
CCATTCCAGAGTTCCACTTAGGAACGGAGGAGGAGGATCCCCTCGGAAAG
AGCATCAAAAGTATGAAATCATGTGCTAATAGAAGTAATATCAGTTTCAA
GAGCGAGGATTCTGGCATTGACGAGGAAAGCTTTAAGGAGAGTAAGCCTC
ATAATAATCCATGCGCCAATTGCCTTGATCTCCAACAGCAATTGGCAGCA
GCTCATCTTCGCATTCAGCAACTTGAGGAAAGAAGGCAAGAGGAGACAGA
CAGTGATGATGATGAGGAGGGGGAGGAGGAGGAGCACATATTCATGCTAA
TGAAGTAGAAGCTTTCTAGACCAT
BS29782.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:45:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14860-RB | 792 | CG14860-PB | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:45:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14860-RB | 1603 | CG14860-RB | 52..844 | 17..809 | 3965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:45:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14895133..14895687 | 255..809 | 2775 | 100 | Plus |
| 3R | 32079331 | 3R | 14894835..14895072 | 17..254 | 1190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:45:46 has no hits.
BS29782.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 14:34:12 Download gff for
BS29782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14860-RB | 52..843 | 17..808 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:48 Download gff for
BS29782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14860-RB | 52..843 | 17..808 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:45 Download gff for
BS29782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14860-RB | 52..843 | 17..808 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:45 Download gff for
BS29782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14894835..14895072 | 17..254 | 100 | -> | Plus |
| 3R | 14895133..14895686 | 255..808 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:48 Download gff for
BS29782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10720557..10720794 | 17..254 | 100 | -> | Plus |
| arm_3R | 10720855..10721408 | 255..808 | 100 | | Plus |
BS29782.pep Sequence
Translation from 16 to 807
> BS29782.pep
MKNQNLRCIVTDCYKSGQQDSSSMYKFPINPVVRQKWLDNIADIKDINLF
NSRVCRRHFETQCFGKTKVFSWAVPTLFLNTKEVVHQVSKPSRNSFIRRC
SVRNCSSRSPPERLHFFPSNPEMRKAWMEICRLTVDNKWLFICGRHFRRT
YLPNKGNLRKDAIPEFHLGTEEEDPLGKSIKSMKSCANRSNISFKSEDSG
IDEESFKESKPHNNPCANCLDLQQQLAAAHLRIQQLEERRQEETDSDDDE
EGEEEEHIFMLMK*
BS29782.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14860-PB | 263 | CG14860-PB | 1..263 | 1..263 | 1419 | 100 | Plus |
| CG10631-PA | 3781 | CG10631-PA | 1664..1935 | 5..257 | 197 | 23.6 | Plus |
| CG10631-PA | 3781 | CG10631-PA | 2606..2789 | 8..183 | 172 | 29.2 | Plus |
| CG10631-PA | 3781 | CG10631-PA | 562..761 | 3..188 | 168 | 25.9 | Plus |
| CG10631-PA | 3781 | CG10631-PA | 1334..1502 | 8..174 | 155 | 30.6 | Plus |
| CG10631-PA | 3781 | CG10631-PA | 1425..1603 | 8..176 | 153 | 25.4 | Plus |
