Clone BS29804 Report

Search the DGRC for BS29804

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:298
Well:4
Vector:pDNR-Dual
Associated Gene/TranscriptCG15472-RA
Protein status:BS29804.pep: full length peptide match
Sequenced Size:938

Clone Sequence Records

BS29804.complete Sequence

938 bp assembled on 2012-05-24

GenBank Submission: KX806437

> BS29804.complete
GAAGTTATCAGTCGACATGGACCGAAATAAGCCACTCAGACTAATTGGCC
TCTCCAGTACCGAGCCCGAAAAACAAACGAAACTTACACTGAACCATCTA
TGTCAGCTGCCAGCACAATGTCCCATAGAAAAATGCATTTCCACCGTTTT
CAAGGATGATATGCTCCAACATTTGGCCCAACGCCATTTCCGATCAAATG
TGAAAAAGCATTTGCAAGTGGCCTTCAACGGAGAACGCTGTACCCTGGTC
TTTGATGTTTCTCAGCTGATTGGAACGCAGACCATATGTCTGGGAGTTCT
TCTTTACGGCGGCGTGCGTGGTAAGCATAGCCAATTACCCGGAGAACGAG
AATTCTGTTATCACAATCGATTGAAAGAGGATTCGGGGCTGGAATCGCTG
AAGGACTATCTGCCCATTATGGTGCTGGTGAAGAGGACAACATTCCTCTG
CTGGGCACTTGTGGACAGAAAAATGGAATCGCAAGAAGATCTTAATGGTA
AACAGTCAAAAGATCTTAAGCAGGTAAAACATCTAGATTTCTCAAATGAT
ACGCATCCCAAATGCAGTGAAGAATCGATCAAAAGGTGCGATAGTGGCCA
AAAGAATAACGATCTAAAGACGACCACTGAAGCCGAGCAGGAAGAGATTA
TGGACTCCGATATCTTGATAATTTGGACCCAAAGTGCACCCTGCATCCGA
CCACTCCACGTTGCCATGACCGTATTCAACAGCACCTTGTCGGTTGGCCG
GAGCGCCATGCGTTGTGTGGCAAATTCGGGCCAAATGTATACCGAAATCG
GTGGCAAGGATCTGCCCAAGGACCGGCATTCCCTTTTGATAACGCAGCAA
GAATTGAAGGAGATATGTGGCGCAGAACATCATCTCCATCTCGAACTGAT
CCTGCATGAGCCTTTGGAATAAAAGCTTTCTAGACCAT

BS29804.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:25:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG15472-RA 906 CG15472-PA 1..906 17..922 4530 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:25:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG15472-RA 1411 CG15472-RA 64..969 17..922 4530 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:25:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4769169..4770074 922..17 4530 100 Minus
Blast to na_te.dros performed on 2014-11-28 11:25:23 has no hits.

BS29804.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:34 Download gff for BS29804.complete
Subject Subject Range Query Range Percent Splice Strand
CG15472-RA 10..913 17..920 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:34 Download gff for BS29804.complete
Subject Subject Range Query Range Percent Splice Strand
CG15472-RA 64..967 17..920 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:48 Download gff for BS29804.complete
Subject Subject Range Query Range Percent Splice Strand
CG15472-RA 64..967 17..920 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:48 Download gff for BS29804.complete
Subject Subject Range Query Range Percent Splice Strand
X 4769171..4770074 17..920 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:34 Download gff for BS29804.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4663204..4664107 17..920 100   Minus

BS29804.pep Sequence

Translation from 16 to 921

> BS29804.pep
MDRNKPLRLIGLSSTEPEKQTKLTLNHLCQLPAQCPIEKCISTVFKDDML
QHLAQRHFRSNVKKHLQVAFNGERCTLVFDVSQLIGTQTICLGVLLYGGV
RGKHSQLPGEREFCYHNRLKEDSGLESLKDYLPIMVLVKRTTFLCWALVD
RKMESQEDLNGKQSKDLKQVKHLDFSNDTHPKCSEESIKRCDSGQKNNDL
KTTTEAEQEEIMDSDILIIWTQSAPCIRPLHVAMTVFNSTLSVGRSAMRC
VANSGQMYTEIGGKDLPKDRHSLLITQQELKEICGAEHHLHLELILHEPL
E*

BS29804.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG15472-PA 301 CG15472-PA 1..301 1..301 1588 100 Plus