Clone BS29825 Report

Search the DGRC for BS29825

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:298
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG1722-RA
Protein status:BS29825.pep: full length peptide match
Sequenced Size:875

Clone Sequence Records

BS29825.complete Sequence

875 bp assembled on 2012-05-24

GenBank Submission: KX802621

> BS29825.complete
GAAGTTATCAGTCGACATGCCCAAGTCCAAGCAGAGATCGCCAATAAAAG
CGGCTACAAAACCGCTTAGCACAAAGAAGCTACAGTCCAAAGTCAAAAGT
GTCGGTAAGACCAAGCCGAAAATGCAGCAGAAATCCGTAAAGCAACCGCT
CAAGAAACCCATGAGACGATCTCCGCTGATGCGAGCCGCCCTCCAGCCCA
CCATTTTGGGCTTGGCCAAGGAAAAGCCGGTGAAAAAGTCGCGGGTGACC
TTCAAGAAGTCACATCGTCGGCCGCTGGACGCCATGCAATCCCTTGGGAT
GTCCCGCAGGACCAGACTCATAGACGCCAGTCCCCAGAGAAAGGCCAAGG
GTACTTCGGTACTGTTCCTGGGTAAGGATTCAAGGACCACCAAGATGCCC
AAGAAAATGAAGCCCTCAAGCGAAAAGCCTGCAAGCGAAAAAAATCAGTT
ACCCCGGTTAAAAAGACGGATGGAATTCCGAGTAATGACGAAAGCCGAGA
CTAGGGCTACCGACGGCGTGAACTTCTTCTGCAATCTCGGCGTAAAGATG
CAGCCACCGGTGACTCGGAAATATCAACAGCTGCAACAACGAGGTGAAGC
AGGATTTGAGGGAAGATTGGCAGGTGGAGAAGGTACTAGACCGGGTGACG
GCGCCTTGCGGAGACCAGTGAGAACCCAGCCATCTGGTCTGTCATCCCTA
GTCGGTAAAGTCGCCGGTATCGGTGCGTTCGCCAATGATGTGCTGGTCCC
GCTGACCGGCCGGTTGCCCATCATCGACTTTATCTCTACCAAAGAGTTCC
AGAATATGTCTGCCGCTTCGAAATGGAAGCCGCACTCGCGGAAAAATACC
CATTTATAGAAGCTTTCTAGACCAT

BS29825.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:25:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG1722-RA 843 CG1722-PA 1..843 17..859 4215 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:25:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG1722-RA 1173 CG1722-RA 124..967 17..860 4220 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21250182..21251025 860..17 4220 100 Minus
Blast to na_te.dros performed on 2014-11-28 11:25:35 has no hits.

BS29825.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:36 Download gff for BS29825.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 124..966 17..859 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:40 Download gff for BS29825.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 124..966 17..859 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:42:54 Download gff for BS29825.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 124..966 17..859 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:42:54 Download gff for BS29825.complete
Subject Subject Range Query Range Percent Splice Strand
X 21250183..21251025 17..859 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:40 Download gff for BS29825.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21121210..21122052 17..859 100   Minus

BS29825.pep Sequence

Translation from 16 to 858

> BS29825.pep
MPKSKQRSPIKAATKPLSTKKLQSKVKSVGKTKPKMQQKSVKQPLKKPMR
RSPLMRAALQPTILGLAKEKPVKKSRVTFKKSHRRPLDAMQSLGMSRRTR
LIDASPQRKAKGTSVLFLGKDSRTTKMPKKMKPSSEKPASEKNQLPRLKR
RMEFRVMTKAETRATDGVNFFCNLGVKMQPPVTRKYQQLQQRGEAGFEGR
LAGGEGTRPGDGALRRPVRTQPSGLSSLVGKVAGIGAFANDVLVPLTGRL
PIIDFISTKEFQNMSAASKWKPHSRKNTHL*

BS29825.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:37:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG1722-PA 280 CG1722-PA 1..280 1..280 1420 100 Plus