BS29861.complete Sequence
2063 bp assembled on 2012-06-18
GenBank Submission: KX802946
> BS29861.complete
GAAGTTATCAGTCGACATGATTAAAAGTGAAGAAGCCTCCGATCGTTCGG
TTATGACCATGGATCAGCTGGGTGGCTACTACCACGATCCCCGCGCCCAT
CCCCCTTTCAGCCACCCACATGCACACTCCCACCCACATCAACACACCCA
CACTGGACATCCATATAGAGCTGGGAATCTGTTAACCGGTGGCAATTACC
AGGCAATGGGTGGCGGAGAATCACCCACGGAGCTGATCGATGAGAAACCG
AACATCGGGTATATGGAGCTAAAGCATTATATGGACGCTACGCCCACTGC
CACGCCCGTTTCGGCAGCACAACATTATAGCCTAAGTGCGCTGCACAGCA
TGGGTACACCGCCGGCATCCTCCAGTCCCATACCACCGTACGGGGTTCTA
ATGACTGCCCATTCGGCTGGATCCGCTTCTCCGCAATCGAATTCGAAGAC
GCCCACGGATCTGCCGCAGGATTTGCAGTATGCGAGCTCCAGCACATCAA
CCGCCAAGGTGCAGCCATTGCAGGTGCAGCTGCAGCCACTCAACCATCAG
TACGCGTCCACCATTAAGTACTGCTCCAACAACACCATACTCAGTGCGAA
CGACTACCAATTGCTGACCAGCCAGGAGCAGGCGGGGCAACAGCAGCCGC
AGCAGTTGCCAGCCCAGCAGCTCCAGCATTCACCAGGCGGTGGCTACATG
TCGCGCATTTCCACATCGCCGTCGCAGGTGATCAGCAATGCGCACGGCAT
GCCCGTGCTAAACTACTCCAGCTCGAGTTCCTCGCCTGCCAAGTCGCTCA
ACGGTTCCGAATCCTCGCCGCCCAGTCAGAATCATCTGGAGAACAAGGTT
TCGGGCTCAGCGGTGGTTGGTACAGGTGGTTCCAGTCAGCAGGATGCGCC
GAGCACTCCGGATACCACCAAGAAGTCTGGTACCCGGCGGCCAGAGAAAC
CAGCACTCAGCTATATCAATATGATTGGGCATGCGATCAAGGAATCACCA
ACTGGAAAGCTAACGCTCTCCGAGATCTACGCCTACTTGCAGAAGAGCTA
CGAATTCTTTCGAGGACCCTACGTGGGCTGGAAGAACTCGGTGCGCCACA
ATCTCAGCCTGAACGAGTGCTTCAAGAAGCTGCCAAAGGGCATGGGCGTG
GGCAAGCCGGGCAAGGGCAACTACTGGACCATTGACGAGAACTCGGCTCA
TCTCTTCGAGGACGAGGGCAGCCTGAGGCGCCGGCCGCGTGGCTATCGCT
CCAAGATCAAGGTGAAGCCGTATGCCGGCCATGCCAATGGATACTACGCC
AGCGGCTATGGCGATGCGGGAATGGACAATGGCAACTATTACGCCTCGCC
TGCCTTTGCTAGCTACGATTACAGTGCAGCTGGAGCCACTGGCGTCTCGC
CGGCTGGTGGTCAAGGATTCGCCGATCCCTGGAACGCCCATGCCGCCCAC
AGTGGCTCGTCGTCGGTGGGCGTGGGCATGGGCGTGGGTCCCCTGCCCCA
GTATACGAACATATCCTGCCTGGCAGCCGGAGGCAATGTGAATGGCTCGG
CTACCACGCCCCCGCTGGCCCACTCCGCACTGGGAATGGCCCCATCGGCA
TCATCCTCAAGTTCGCCACTGGGAGCGGCGGCGACGCTTCAAAGCGATTA
TGCGCCAACCGCGAGTCTCGTGGCCGCTGGCTATTCCTATGCAACAAGTG
CCGGCAGCCTGGACAACGGCCTCCGTTCGATTTCGCTGCAGCAGCTGCCC
GGATTGTCCAGCATCCAGCATGCCCAGGCTCAGGCCCAAGCACAGGCGCA
CCACCATCACCATCAGCACCATGCGAGCCACCCCAGCCACAGCCATCAGG
GCCACGGATCCATGCACCAGAATCACGGCACATCATCCACGACGCCACCA
CCATCGCAGTCCGGTGGCAGCCATGGGATCGATCATTCGCCCATTGATCG
CAAGCCGGCCTACCTGCCGCCCATCAGCCCGCCCCCCATGATGGTGGCTC
TGAATGGGGGCGGTGGATACTACGAGGGACTCAAGTACGCCAACTAGAAG
CTTTCTAGACCAT
BS29861.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:35:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bin-RA | 2031 | CG18647-PA | 1..2031 | 17..2047 | 10155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:35:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bin-RA | 2412 | CG18647-RA | 210..2240 | 17..2047 | 10155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:35:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6990831..6991861 | 17..1047 | 5155 | 100 | Plus |
| 3L | 28110227 | 3L | 6993023..6993418 | 1324..1719 | 1980 | 100 | Plus |
| 3L | 28110227 | 3L | 6993946..6994275 | 1718..2047 | 1650 | 100 | Plus |
| 3L | 28110227 | 3L | 6992674..6992953 | 1046..1325 | 1400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:35:23 has no hits.
BS29861.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-18 13:51:02 Download gff for
BS29861.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bin-RA | 210..2240 | 17..2047 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:39 Download gff for
BS29861.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bin-RA | 210..2240 | 17..2047 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:47:19 Download gff for
BS29861.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bin-RA | 210..2240 | 17..2047 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:47:19 Download gff for
BS29861.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6990831..6991861 | 17..1047 | 100 | -> | Plus |
| 3L | 6992676..6992952 | 1048..1324 | 100 | -> | Plus |
| 3L | 6993024..6993417 | 1325..1718 | 100 | -> | Plus |
| 3L | 6993947..6994275 | 1719..2047 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:39 Download gff for
BS29861.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6983931..6984961 | 17..1047 | 100 | -> | Plus |
| arm_3L | 6985776..6986052 | 1048..1324 | 100 | -> | Plus |
| arm_3L | 6986124..6986517 | 1325..1718 | 100 | -> | Plus |
| arm_3L | 6987047..6987375 | 1719..2047 | 100 | | Plus |
BS29861.pep Sequence
Translation from 16 to 2046
> BS29861.pep
MIKSEEASDRSVMTMDQLGGYYHDPRAHPPFSHPHAHSHPHQHTHTGHPY
RAGNLLTGGNYQAMGGGESPTELIDEKPNIGYMELKHYMDATPTATPVSA
AQHYSLSALHSMGTPPASSSPIPPYGVLMTAHSAGSASPQSNSKTPTDLP
QDLQYASSSTSTAKVQPLQVQLQPLNHQYASTIKYCSNNTILSANDYQLL
TSQEQAGQQQPQQLPAQQLQHSPGGGYMSRISTSPSQVISNAHGMPVLNY
SSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDT
TKKSGTRRPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRG
PYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDE
GSLRRRPRGYRSKIKVKPYAGHANGYYASGYGDAGMDNGNYYASPAFASY
DYSAAGATGVSPAGGQGFADPWNAHAAHSGSSSVGVGMGVGPLPQYTNIS
CLAAGGNVNGSATTPPLAHSALGMAPSASSSSSPLGAAATLQSDYAPTAS
LVAAGYSYATSAGSLDNGLRSISLQQLPGLSSIQHAQAQAQAQAHHHHHQ
HHASHPSHSHQGHGSMHQNHGTSSTTPPPSQSGGSHGIDHSPIDRKPAYL
PPISPPPMMVALNGGGGYYEGLKYAN*
BS29861.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:04:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bin-PA | 676 | CG18647-PA | 1..676 | 1..676 | 3605 | 100 | Plus |
| fkh-PD | 510 | CG10002-PD | 3..305 | 86..408 | 274 | 29.1 | Plus |
| fkh-PB | 510 | CG10002-PB | 3..305 | 86..408 | 274 | 29.1 | Plus |
| fkh-PA | 510 | CG10002-PA | 3..305 | 86..408 | 274 | 29.1 | Plus |
| fkh-PE | 518 | CG10002-PE | 3..305 | 86..408 | 274 | 29.1 | Plus |
