BS29890.complete Sequence
956 bp assembled on 2012-06-04
GenBank Submission: KX802448
> BS29890.complete
GAAGTTATCAGTCGACATGACTCGCCACGCACGTAACTGCACGGCCGGAG
CCGTGTACACCTACAACGAGAAGAAGCGTGACGCGGCGGAGTCCGGCTAC
GGCACGAATGCCCAGCGCCTGGGCAAGGATTCGGTGAAATCCTTCGACTG
CTGCTCCTTGACGCTGCAACCATGTCGCAGGCCAGTGATCACCAAGGATG
GCTATCTATTCGACAAGGAGGCCATCCTGCAGTACATCGTGACCAAGAAG
AACGAGTACAGCCGCCGACTGAAGGAGTACGAGCGTCTGCGGCGCGCGGA
GGAGGATAAACTGAGCCAGGAGGCCAACAGCAAGCAGCAGGCGCGCATGG
AGCGCTTTGTTAATGCCGAGAAGCCAGCGATGACACCCGCCCACTCCTCG
GCCGCTGCCAGCGAGAAGCCGTCGACCTCTTCCGCCGCTGCTGCCGCTTC
ATCTGAATCCTCGTCCGCATCCTCGATATCCAACATGACCAACGGGCACG
AGAAGAAGCTGCCCAGCTTCTGGCTGCCCTCCGAGTGCCCCAATGCCGGG
TTAGCCAAGGCCCAGAAGCCCGACGCCACCATCTACTGCCCGGTGTCGCA
GAAACCGCTGCGAGTCAAGGATCTGATTGATGTGAAGTTCACGCTGCTCA
AGGACGGCGACACGAAGCGCTCGCTGATTGCCAAGGAGGCGCGCTACATG
TGCCCCATTACCCACGACGTGCTCAGCAACGCGGTGCCCTGCGCTGTGCT
GCGTCCCACTGGCGATGTGGTGACCATGGAGTGCGTGGAACGGCTGATCA
GAAAGGACATGATCCATCCGCTCACGGATCGCAAGCTCAAGGAGAAGGAC
ATCATTCCCCTGCAGCGAGGCGGCACTGGCTACGCAACGACGAACGACCA
CCTCCAGGCCAAGGAAAAACGGCCCATGCTCCAGGCCTAAAAGCTTTCTA
GACCAT
BS29890.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:32:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6179-RA | 924 | CG6179-PA | 1..924 | 17..940 | 4620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:32:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6179-RA | 1276 | CG6179-RA | 107..1030 | 17..940 | 4620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:32:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18380188..18380930 | 17..759 | 3715 | 100 | Plus |
| X | 23542271 | X | 18380991..18381100 | 760..869 | 550 | 100 | Plus |
| X | 23542271 | X | 18381162..18381233 | 869..940 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:32:51 has no hits.
BS29890.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-04 11:21:28 Download gff for
BS29890.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6179-RA | 106..1027 | 17..938 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:37 Download gff for
BS29890.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6179-RA | 107..1028 | 17..938 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:46:23 Download gff for
BS29890.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6179-RA | 107..1028 | 17..938 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:46:23 Download gff for
BS29890.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18380188..18380930 | 17..759 | 100 | -> | Plus |
| X | 18380991..18381099 | 760..868 | 100 | -> | Plus |
| X | 18381162..18381231 | 869..938 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:37 Download gff for
BS29890.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18274221..18274963 | 17..759 | 100 | -> | Plus |
| arm_X | 18275024..18275132 | 760..868 | 100 | -> | Plus |
| arm_X | 18275195..18275264 | 869..938 | 100 | | Plus |
BS29890.pep Sequence
Translation from 16 to 939
> BS29890.pep
MTRHARNCTAGAVYTYNEKKRDAAESGYGTNAQRLGKDSVKSFDCCSLTL
QPCRRPVITKDGYLFDKEAILQYIVTKKNEYSRRLKEYERLRRAEEDKLS
QEANSKQQARMERFVNAEKPAMTPAHSSAAASEKPSTSSAAAAASSESSS
ASSISNMTNGHEKKLPSFWLPSECPNAGLAKAQKPDATIYCPVSQKPLRV
KDLIDVKFTLLKDGDTKRSLIAKEARYMCPITHDVLSNAVPCAVLRPTGD
VVTMECVERLIRKDMIHPLTDRKLKEKDIIPLQRGGTGYATTNDHLQAKE
KRPMLQA*
BS29890.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:02:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6179-PA | 307 | CG6179-PA | 1..307 | 1..307 | 1585 | 100 | Plus |
