BS29910.complete Sequence
648 bp assembled on 2012-05-24
GenBank Submission: KX806083
> BS29910.complete
GGGAAGGGCGGAGGGAAGCGCGGCCCGCCTATCTTTCGTATAGCATATCT
TATACGAAGTTATCAGTCGACATGAAATTCCTTATTGCCTTCGCCCTGTT
CGCCTGCGTGGCCGCCGATGTTAGCCACCTGAGCAACGAGTACCTGCCCC
CCGTCCAGAGCTCGTACGCCGCTCCCTCGGTGAGCTACTCCGCACCAGCC
GTGCAGCAGACCTACGCCGCTCCAGCCATCCAGCAGTCGTATGTCGCCCC
CAGCAACGAGTACCTGCCTCCTGTGCAGACCTACTCCGCACCGGCCGTCC
AGAGGACCTACTCCGCACCAGCTGTCCAGAGGACCTACTCCGCCCCCTCT
GTTAGCTACTCGGCACCCTCTGTGAGCTACTCGGCTCCATCGGTCAGCTA
CTCCGCTCCTGCTGTCCAGCAGTCGTACTCCGCTCCATCGGTCAGCTACT
CCGCCCCTGCTGTCCAGCAGTCGTACTCCGCTCCATCGGTCAGCTACTCC
GCCCCTGCTGTCCAGCAGTCGTACTCCGCTCCTGCCGTCAGCTACTCCGC
CCCATCGGTGAGCTACTCCGCACCCTCCGTGGATGTGGGCACCCAGTACG
CCTCCAACGGTGGCTACGTCTACAGGAAGTAGAAGCTTTCTAGACCAT
BS29910.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:28:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1368-RA | 561 | CG1368-PA | 1..561 | 72..632 | 2790 | 99.8 | Plus |
| CG1368-RA | 561 | CG1368-PA | 307..434 | 426..553 | 565 | 96.1 | Plus |
| CG1368-RA | 561 | CG1368-PA | 355..482 | 378..505 | 565 | 96.1 | Plus |
| CG1368-RA | 561 | CG1368-PA | 307..386 | 474..553 | 325 | 93.8 | Plus |
| CG1368-RA | 561 | CG1368-PA | 403..482 | 378..457 | 325 | 93.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:28:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1368-RA | 774 | CG1368-RA | 72..632 | 72..632 | 2790 | 99.8 | Plus |
| CG1368-RA | 774 | CG1368-RA | 378..505 | 426..553 | 565 | 96.1 | Plus |
| CG1368-RA | 774 | CG1368-RA | 426..553 | 378..505 | 565 | 96.1 | Plus |
| CG1368-RA | 774 | CG1368-RA | 378..457 | 474..553 | 325 | 93.8 | Plus |
| CG1368-RA | 774 | CG1368-RA | 474..553 | 378..457 | 325 | 93.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:28:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14174970..14175528 | 74..632 | 2780 | 99.8 | Plus |
| X | 23542271 | X | 14175274..14175401 | 426..553 | 565 | 96.1 | Plus |
| X | 23542271 | X | 14175322..14175449 | 378..505 | 565 | 96.1 | Plus |
| X | 23542271 | X | 14175274..14175353 | 474..553 | 325 | 93.8 | Plus |
| X | 23542271 | X | 14175370..14175449 | 378..457 | 325 | 93.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:28:18 has no hits.
BS29910.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:57:05 Download gff for
BS29910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1368-RA | 62..627 | 67..632 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:06 Download gff for
BS29910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1368-RA | 67..632 | 67..632 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:44:10 Download gff for
BS29910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1368-RA | 67..632 | 67..632 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:44:10 Download gff for
BS29910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14174968..14175528 | 71..632 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:06 Download gff for
BS29910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14069001..14069561 | 71..632 | 99 | | Plus |
BS29910.pep Sequence
Translation from 71 to 631
> BS29910.pep
MKFLIAFALFACVAADVSHLSNEYLPPVQSSYAAPSVSYSAPAVQQTYAA
PAIQQSYVAPSNEYLPPVQTYSAPAVQRTYSAPAVQRTYSAPSVSYSAPS
VSYSAPSVSYSAPAVQQSYSAPSVSYSAPAVQQSYSAPSVSYSAPAVQQS
YSAPAVSYSAPSVSYSAPSVDVGTQYASNGGYVYRK*
BS29910.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:59:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1368-PA | 186 | CG1368-PA | 1..186 | 1..186 | 932 | 100 | Plus |
| CG32603-PA | 345 | CG32603-PA | 156..345 | 14..184 | 389 | 51.8 | Plus |
| CG32603-PA | 345 | CG32603-PA | 1..244 | 1..174 | 343 | 44.3 | Plus |
| CG11350-PC | 456 | CG11350-PC | 1..161 | 1..178 | 343 | 50.8 | Plus |
| CG34205-PA | 217 | CG34205-PA | 23..212 | 1..173 | 311 | 39.9 | Plus |
| CG11350-PC | 456 | CG11350-PC | 220..444 | 21..185 | 306 | 40.3 | Plus |
| CG11350-PC | 456 | CG11350-PC | 108..302 | 31..185 | 282 | 42.2 | Plus |
| CG11585-PB | 342 | CG11585-PB | 100..298 | 14..181 | 280 | 46.1 | Plus |
| CG11350-PC | 456 | CG11350-PC | 315..437 | 16..139 | 261 | 53.8 | Plus |
