BS29916.complete Sequence
758 bp assembled on 2012-05-24
GenBank Submission: KX806405
> BS29916.complete
GAAGTTATCAGTCGACATGAATGCAACGTTCCATTCATACAGAGACATAC
TAGCGGCACATCACCAAGACTCATCTAGTCCTGAGAACTTCGCCCCCATA
GTAATTGACTATAGAAACTCAAACCACACAAAGGACACTGTGGAGACCAA
CTCGAATATCTCATCGTCTCAGCTATCGTTCATGGACGAATCTTCAAACG
ATTTCAATAATCAGCAGTTAATTCATTCCAACTCCCTTATTAAAGTGTGT
GGTGGTTGTGGAGATAAAATAAGTGATAGATATCTTTTATACGCTTTGGA
CAGATACTGGCACAATGGCTGCCTTAAATGTCACTGCTGTGGAGCTATGC
TAGCAGAAGTGGGTTCCAGCTGTTTTACGAGGCGAGGCCTGATTCTTTGC
AAAAAGGACTATTCCAGCATGTTCGGGTGCTCCGGAGTTTGTTCTGGCTG
CGGAGAAACTATACCGCCAAGTGAACTGGTAGCGAAAGCACTTACTGGAA
TAAATAATATCGATTTACAAAATCAACAAAAACAAATAATTAATTGCGTA
TTTCATCTAAGGTGCTTTAGTTGTGCTAAGTGTGGATCCAGTCTGCGTCC
TGGTGATAGGTATACTATGTTAGGAGCTAGCTTGGTGTGTGAACAAGATT
GGCACAAATTACTTAAGGGCCCCGCCAACTCGAATGGAACGCTTGGACAA
AGGAAAGGAAAGGTCGGTAGGCCCAGAAGATCAAAGGACTAAAAGCTTTC
TAGACCAT
BS29916.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:26:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5708-RC | 726 | CG5708-PC | 1..726 | 17..742 | 3630 | 100 | Plus |
CG5708-RB | 726 | CG5708-PB | 1..726 | 17..742 | 3630 | 100 | Plus |
CG5708-RA | 726 | CG5708-PA | 1..726 | 17..742 | 3630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:26:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5708-RC | 1326 | CG5708-RC | 298..1023 | 17..742 | 3630 | 100 | Plus |
CG5708-RB | 1036 | CG5708-RB | 206..931 | 17..742 | 3630 | 100 | Plus |
CG5708-RA | 1128 | CG5708-RA | 298..1023 | 17..742 | 3630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:26:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10225500..10225750 | 267..17 | 1240 | 99.6 | Minus |
2L | 23513712 | 2L | 10224954..10225155 | 613..412 | 1010 | 100 | Minus |
2L | 23513712 | 2L | 10225279..10225434 | 417..262 | 780 | 100 | Minus |
2L | 23513712 | 2L | 10224760..10224894 | 742..608 | 675 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 11:26:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Doc | 4725 | Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). | 4687..4724 | 499..536 | 109 | 76.3 | Plus |
BS29916.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:45 Download gff for
BS29916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5708-RB | 206..929 | 17..740 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:05 Download gff for
BS29916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5708-RA | 298..1021 | 17..740 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:43:16 Download gff for
BS29916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5708-RA | 298..1021 | 17..740 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:43:16 Download gff for
BS29916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10224762..10224892 | 610..740 | 100 | <- | Minus |
2L | 10224958..10225149 | 418..609 | 100 | <- | Minus |
2L | 10225279..10225432 | 264..417 | 100 | <- | Minus |
2L | 10225504..10225750 | 17..263 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:05 Download gff for
BS29916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10224762..10224892 | 610..740 | 100 | <- | Minus |
arm_2L | 10225279..10225432 | 264..417 | 100 | <- | Minus |
arm_2L | 10224958..10225149 | 418..609 | 100 | <- | Minus |
arm_2L | 10225504..10225750 | 17..263 | 100 | | Minus |
BS29916.pep Sequence
Translation from 16 to 741
> BS29916.pep
MNATFHSYRDILAAHHQDSSSPENFAPIVIDYRNSNHTKDTVETNSNISS
SQLSFMDESSNDFNNQQLIHSNSLIKVCGGCGDKISDRYLLYALDRYWHN
GCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSGVCSGCGETIP
PSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYT
MLGASLVCEQDWHKLLKGPANSNGTLGQRKGKVGRPRRSKD*
BS29916.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:38:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5708-PC | 241 | CG5708-PC | 1..241 | 1..241 | 1312 | 100 | Plus |
CG5708-PB | 241 | CG5708-PB | 1..241 | 1..241 | 1312 | 100 | Plus |
CG5708-PA | 241 | CG5708-PA | 1..241 | 1..241 | 1312 | 100 | Plus |
Bx-PC | 313 | CG44425-PC | 52..227 | 29..229 | 335 | 34.8 | Plus |
Bx-PA | 313 | CG44425-PA | 52..227 | 29..229 | 335 | 34.8 | Plus |