BS29919.complete Sequence
788 bp assembled on 2012-05-24
GenBank Submission: KX804354
> BS29919.complete
GAAGTTATCAGTCGACATGGCCACCTCAGTCCTGCTAGCCTGTGGACTCA
ATGAGCAGAAATTGCCAGGATTTGTCCACATCAGCGAGGAGTCCAATGTG
GATGCCAGCTTTTTGATCAGCTGCGTTTTGGGTCAGAGATTGCGCATCTC
AAATGCTGGAACTCTGCTCGTCTGTTTGCAGCATCACTACCAGCATTATT
TTAATGCTGGCATGAGGTTGGGCTATAATACGAACATTTTCCAGGGGAAA
ACTCTGGGTGTTATCGATGTTCTGAGCGACATGGCCGGCGAGGGATTGGC
TTCCAAATGGCTAACGAATACCGAGGGTCAGACATTAACCGACCAGCTAG
TAGAGGATATTCGCGCCCAGGTGGAGAGGAACTATGCCAGTCGCAACTCA
TATACGGTTCTGATCGACAATCTGTCCATATTGTTCAATTTGGGAGCAAG
CAAGCTGCAGGTTCAGCAGTTCTGCCAGGACCTGGCTGCGCTAGGCAAGG
AGCGCGAAAAGCTGACGGTGATCACCAAGCTCAGCAACAGCGACATCTAC
CAGCTGACGGACAACAATGTCGCCAAGCTCGGTCAGGTGCGCATCCAGGT
GTTGCGTTTAAAGAGCGGTGTCTTCCGTGAGGTGGATGGCAAGCTGCTAA
TCGAACGCGTTCTGGACGAAGGAAACTATGCCTGCGAGGAGACACGCAAG
GAGGTGCTCTACAAGGTCAACGATCGCAACGTCAAGGTCTTTGCACCCGG
CGAAATTGGGGTCAAAGTCTAAAAGCTTTCTAGACCAT
BS29919.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:26:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| poly-RB | 756 | CG9829-PB | 1..756 | 17..772 | 3780 | 100 | Plus |
| poly-RA | 756 | CG9829-PA | 1..756 | 17..772 | 3780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:26:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| poly-RB | 1314 | CG9829-RB | 282..1042 | 17..777 | 3790 | 99.9 | Plus |
| poly-RA | 1157 | CG9829-RA | 161..921 | 17..777 | 3790 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:26:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13362088..13362848 | 777..17 | 3790 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:26:38 has no hits.
BS29919.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:47 Download gff for
BS29919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| poly-RB | 282..1035 | 17..770 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:11 Download gff for
BS29919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| poly-RA | 161..914 | 17..770 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:43:21 Download gff for
BS29919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| poly-RA | 161..914 | 17..770 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:43:21 Download gff for
BS29919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13362095..13362848 | 17..770 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:11 Download gff for
BS29919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9187817..9188570 | 17..770 | 100 | | Minus |
BS29919.pep Sequence
Translation from 16 to 771
> BS29919.pep
MATSVLLACGLNEQKLPGFVHISEESNVDASFLISCVLGQRLRISNAGTL
LVCLQHHYQHYFNAGMRLGYNTNIFQGKTLGVIDVLSDMAGEGLASKWLT
NTEGQTLTDQLVEDIRAQVERNYASRNSYTVLIDNLSILFNLGASKLQVQ
QFCQDLAALGKEREKLTVITKLSNSDIYQLTDNNVAKLGQVRIQVLRLKS
GVFREVDGKLLIERVLDEGNYACEETRKEVLYKVNDRNVKVFAPGEIGVK
V*
BS29919.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:38:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| poly-PB | 251 | CG9829-PB | 1..251 | 1..251 | 1268 | 100 | Plus |
| poly-PA | 251 | CG9829-PA | 1..251 | 1..251 | 1268 | 100 | Plus |
