BS29921.complete Sequence
902 bp assembled on 2012-05-24
GenBank Submission: KX800980
> BS29921.complete
GAAGTTATCAGTCGACATGATTACGATTAAATGTAAAGACACCAATCTGG
ACCCGCTTCCGGTCAAGATTGGTATTATTGGCGGTTCGGGGCTTGACGAC
CCAGATATCCTGGAACAGCGGCAGGAACGTGTGGTGGAGACGCCCTACGG
AGAACCGTCTGATGCATTGATTGAAGGCGAGATCAATGGAGTACAGTGCG
TACTCCTGGCGCGTCATGGACGCAAGCACGACATCATGCCCTCCAATGTT
AACTACCGGGCCAACATCTGGGCTCTACGCGATGTGGGCTGCACCCACTT
AATTGTCTCCACGGCATGTGGATCGTTGCGCGAGGAAATCAAGCCGGGCA
ACCTGGTTGTTCCACACGACTTTATCGACAGGACTACTAAACGCCTTCAG
ACCTTCTACGATGGCAAGGCACAAAGTCCACGTGGTGTTTGCCACCTGCC
CATGTTTCCGGCATTCAGCGAACGCACCCGCAACATTCTGCTTCAGGCGG
CCAAGGAGCTGGAGATTCCCGCCCACGATAAGGCCACCATTGTGACTATT
GAGGGTCCGCGCTTCTCCTCTCGCTCGGAGAGCCACATGTTCCGTCAGTG
GGGCGGGGACCTCATAAACATGACCACGTGTCCAGAAGTGGTGCTAGCCA
AGGAGGCTGGCCTACTTTACGGGTCGGTGGCCATTGCCACGGACTACGAC
TGCTGGCGCATGGGTTGCGAGGGTGTCAACGTGCAGGATGTCCTCCGTAC
TTTTGCCGAGAACGTAATTAAGGTGAAGAAGATTCTGGTCAACGCTGTTG
GTCGAATTGCCAAGGAGGACTGGTCGGAGGACATACTAAATGCCAAGCAA
TGCGTTTGCAACAACACAATGTCTGGAGCCATGTGAAAGCTTTCTAGACC
AT
BS29921.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:26:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mtap-RC | 870 | CG4802-PC | 1..870 | 17..886 | 4350 | 100 | Plus |
Mtap-RB | 1083 | CG4802-PB | 1..870 | 17..886 | 4350 | 100 | Plus |
Mtap-RA | 870 | CG4802-PA | 1..870 | 17..886 | 4350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:26:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mtap-RC | 1392 | CG4802-RC | 248..1118 | 16..886 | 4355 | 100 | Plus |
Mtap-RB | 1234 | CG4802-RB | 90..960 | 16..886 | 4355 | 100 | Plus |
Mtap-RA | 1234 | CG4802-RA | 90..960 | 16..886 | 4355 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:26:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17428162..17428943 | 66..847 | 3910 | 100 | Plus |
2R | 25286936 | 2R | 17428042..17428093 | 16..67 | 260 | 100 | Plus |
2R | 25286936 | 2R | 17429001..17429041 | 846..886 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:26:42 has no hits.
BS29921.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:48 Download gff for
BS29921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4802-RA | 324..1192 | 17..885 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:14 Download gff for
BS29921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4802-RA | 91..959 | 17..885 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:43:23 Download gff for
BS29921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mtap-RA | 91..959 | 17..885 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:43:23 Download gff for
BS29921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17428043..17428093 | 17..67 | 100 | -> | Plus |
2R | 17428164..17428943 | 68..847 | 100 | -> | Plus |
2R | 17429003..17429040 | 848..885 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:14 Download gff for
BS29921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13315669..13316448 | 68..847 | 100 | -> | Plus |
arm_2R | 13316508..13316545 | 848..885 | 100 | | Plus |
arm_2R | 13315548..13315598 | 17..67 | 100 | -> | Plus |
BS29921.pep Sequence
Translation from 16 to 885
> BS29921.pep
MITIKCKDTNLDPLPVKIGIIGGSGLDDPDILEQRQERVVETPYGEPSDA
LIEGEINGVQCVLLARHGRKHDIMPSNVNYRANIWALRDVGCTHLIVSTA
CGSLREEIKPGNLVVPHDFIDRTTKRLQTFYDGKAQSPRGVCHLPMFPAF
SERTRNILLQAAKELEIPAHDKATIVTIEGPRFSSRSESHMFRQWGGDLI
NMTTCPEVVLAKEAGLLYGSVAIATDYDCWRMGCEGVNVQDVLRTFAENV
IKVKKILVNAVGRIAKEDWSEDILNAKQCVCNNTMSGAM*
BS29921.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:38:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mtap-PC | 289 | CG4802-PC | 1..289 | 1..289 | 1526 | 100 | Plus |
Mtap-PA | 289 | CG4802-PA | 1..289 | 1..289 | 1526 | 100 | Plus |
Mtap-PB | 360 | CG4802-PB | 1..289 | 1..289 | 1526 | 100 | Plus |
CG31115-PB | 290 | CG31115-PB | 14..285 | 12..283 | 792 | 51.5 | Plus |