BS29939.complete Sequence
269 bp assembled on 2012-05-24
GenBank Submission: KX802475
> BS29939.complete
GAAGTTATCAGTCGACATGTTAGCTGAACAACCGTATATATATATATATA
GTATATATATTACATATATGTATGTATATACAGACACCCACATACGAGCG
CCAATAGAGCGAGATACACCCGTTTTTATTGTGCTGCGCATTTTCAACGT
GCGGCTGAACTGTGAATTCGAGTATAGTACCCTAGATATAGGTAGAATCG
GTACAAACCAGGTGGTACAGGTGGCATCGCGTGCAAAGCCGCACTTGATG
TAAAAGCTTTCTAGACCAT
BS29939.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 11:27:26 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:27:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11000-RC | 6816 | CG11000-RC | 5031..5267 | 17..253 | 1185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:27:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5811473..5811709 | 17..253 | 1185 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 11:27:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Paris | 1730 | Dvir\Paris TV1 1730bp Derived from Z49253. | 997..1043 | 122..168 | 100 | 68.1 | Plus |
BS29939.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:56 Download gff for
BS29939.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31555-RB | 924..1153 | 22..251 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:39 Download gff for
BS29939.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11000-RC | 5036..5265 | 22..251 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:43:43 Download gff for
BS29939.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11000-RC | 5036..5265 | 22..251 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:43:43 Download gff for
BS29939.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5811478..5811707 | 22..251 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:39 Download gff for
BS29939.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1637200..1637429 | 22..251 | 100 | | Plus |
BS29939.pep Sequence
Translation from 16 to 252
> BS29939.pep
MLAEQPYIYIYSIYITYMYVYTDTHIRAPIERDTPVFIVLRIFNVRLNCE
FEYSTLDIGRIGTNQVVQVASRAKPHLM*
Sequence BS29939.pep has no blast hits.
