BS29948.complete Sequence
830 bp assembled on 2012-05-24
GenBank Submission: KX801942
> BS29948.complete
GAAGTTATCAGTCGACATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCAT
TCCTCTCGATATTTTTAGCGATTTATGCTCAATCACTTGATAAGCTGGTG
CCAAACTATGATAATGCCGAGCATCAAATGAAATTTTACGACATCAGATC
GCCGCTCGTTCTCAGCTGCAACGTGAAAGACGGTACGCCGGGCGGCGTGC
TCATATGGAAAAAGAACGGCACCGCTGTGACGGATGTACCTTCTCTCAGA
GGTCGCTTTAAGTTAATCGCAGACGAGAACAAGTTCATCATCGATAAGAC
GGATACGAACGACGATGGCAAATACAGTTGCGAGTTTGACGGCGTGTCCA
AGGAAATCGAAGTAATTGCCCGCGTTGTTGTACGAGTGCCTTCAAATACA
GCCGTTGTGGAGGGTGAAAAGATGTCGGTGACCTGCAGCGTTGTGGGTAC
CAAACCAGAGTTGACATGGACCTTTGCCAATGTAACGCTGACAAATGCCA
CAGATCGCTTCATTCTCAAACCAGACGATAATGGTGTTCCTAACGCCATT
CTGACACTGGATAATGTGACATTGGACGACAGAGGCGAATACAAATGCAT
TGGACGAAATGCGGCCAATGTCTACGGTGGGAACACCACCACTCCTGCCA
GCGACGTCACAACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCT
TTCCTGGGCATCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCAT
TTATGAGAAGCGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATC
CCCAAGAACAGTAAAAGCTTTCTAGACCAT
BS29948.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:27:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bsg-RB | 798 | CG31605-PB | 1..798 | 17..814 | 3990 | 100 | Plus |
Bsg-RH | 798 | CG31605-PH | 1..798 | 17..814 | 3990 | 100 | Plus |
Bsg-RF | 798 | CG31605-PF | 1..798 | 17..814 | 3990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:27:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bsg-RB | 2744 | CG31605-RB | 373..1170 | 17..814 | 3990 | 100 | Plus |
Bsg-RH | 3001 | CG31605-RH | 630..1427 | 17..814 | 3990 | 100 | Plus |
Bsg-RF | 10170 | CG31605-RF | 726..1523 | 17..814 | 3990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:27:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8107237..8107448 | 476..687 | 1030 | 99.1 | Plus |
2L | 23513712 | 2L | 8106839..8107000 | 207..368 | 810 | 100 | Plus |
2L | 23513712 | 2L | 8107747..8107884 | 677..814 | 690 | 100 | Plus |
2L | 23513712 | 2L | 8105691..8105810 | 89..208 | 600 | 100 | Plus |
2L | 23513712 | 2L | 8107065..8107173 | 368..476 | 545 | 100 | Plus |
2L | 23513712 | 2L | 8089664..8089736 | 17..89 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:27:18 has no hits.
BS29948.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:56:54 Download gff for
BS29948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RD | 580..1375 | 17..812 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:35 Download gff for
BS29948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RF | 726..1521 | 17..812 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:43:38 Download gff for
BS29948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RF | 726..1521 | 17..812 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:43:38 Download gff for
BS29948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8089664..8089736 | 17..89 | 100 | -> | Plus |
2L | 8105692..8105809 | 90..207 | 100 | -> | Plus |
2L | 8106840..8107000 | 208..368 | 100 | -> | Plus |
2L | 8107066..8107173 | 369..476 | 100 | -> | Plus |
2L | 8107238..8107438 | 477..677 | 100 | -> | Plus |
2L | 8107748..8107882 | 678..812 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:35 Download gff for
BS29948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8107066..8107173 | 369..476 | 100 | -> | Plus |
arm_2L | 8107238..8107438 | 477..677 | 100 | -> | Plus |
arm_2L | 8107748..8107882 | 678..812 | 100 | | Plus |
arm_2L | 8089664..8089736 | 17..89 | 100 | -> | Plus |
arm_2L | 8105692..8105809 | 90..207 | 100 | -> | Plus |
arm_2L | 8106840..8107000 | 208..368 | 100 | -> | Plus |
BS29948.pep Sequence
Translation from 16 to 813
> BS29948.pep
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNAEHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTDVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAA
NVYGGNTTTPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEKRR
NKSELEESDTDPQEQ*
BS29948.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:38:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bsg-PB | 265 | CG31605-PB | 1..265 | 1..265 | 1369 | 100 | Plus |
Bsg-PH | 265 | CG31605-PH | 1..265 | 1..265 | 1369 | 100 | Plus |
Bsg-PF | 265 | CG31605-PF | 1..265 | 1..265 | 1369 | 100 | Plus |
Bsg-PA | 265 | CG31605-PA | 1..265 | 1..265 | 1369 | 100 | Plus |
Bsg-PI | 265 | CG31605-PI | 1..265 | 1..265 | 1369 | 100 | Plus |