BS30006.complete Sequence
2147 bp assembled on 2012-06-18
GenBank Submission: KX805828
> BS30006.complete
GAAGTTATCAGTCGACATGGAGCAGCGCGCCAACTTTCTGGCTCTGACCC
TCCTGGACGCCCTGGAGGACGAGAACGAGGCTGATATAATGTCGATGCTG
GAGAGGAACAGCATAAATGCTGGCATCGTGCCCTGCGATCGAGGACTGGC
TCCCTTGCACTACGTGTGCGGCATGCGAAACGGGGGACTGGCCCAGCGAA
TCCTGGAGCGGTTTCTCGAGTGCCCCGACCTCGACGTGAATGCCTTGTGC
GACGGCCAGACCACGGCGCTGCACATCGCTAGCATTTATGGGCGGACGGA
ACTGGTTAGGATGCTGCTGGAGCGCGGAGCTTGCGCGGACCTGGCTGATG
AGGATAATAAGCTGCCAGTTCACTACGCCATTGAAGAGTGCCACTTTGAG
GTGCTGCAGCTGCTCCGGGATCACATCTTCCGCGAGAGGCAGATCCAGAA
AAAGCAGCAACAGCGAGTCCAGGTGGTTGACGCTCTAACCCCCAATCAGC
CTAGGTACAATCACGATGTAACTTCCCCGTACTATATTAATATCACTCAC
AGGCGGCATCGACCGCAGCCGAAGTTTCCGGAGCCAACGGAGGTGGAGTG
CGCCGACATTCCACCCCTGCCCGATGAGGAGTCTGTGAACCTGTTTGCCC
TCACTGAAGCTCACCTTACCCAACTCATCCAGAGCCAACGGCAGAACCAG
CCGGAAGATCCTTGTCAGCCAAAGCGGCGAACTCTTATTGAAAGCTGGCG
TGAGAAGGTGGAACGCTCGCGCGCCCGCCAGTCCCTGTTCCATCAGTACG
ATGAGCATGTGGAAGCGATGGTGGATGATGCTATTAGTCAGGAGGACTTC
AACTATAAGGAGCACCTGCAGAAAAAGCTCAGAGACGAGGACAATTCGAA
GAATCTGACAGAGGATGCACCCAACTCGGGTCGTCAGGTGTTCGAGATGC
TAGTGGAGCAAGTCTCTCAGGCTGTCGTCGTGGAGCCGGAACCGGAGCAC
AGTTTCTTTACAGCTCAGGGCGACGAGGTGGACGTGGCGGAGAGCTCAGC
ACGCCAGGATGAGTACTTTCTGCAAATCAAGGAGGCCTACGTTCACACCG
ACGACGAGAATGGGTTAGTTTTCTACGAAGCGAGATACCTACAAAACAGG
GACAGGCGGGAGCCAGTCGAGCAAACTCCCAAAGAGAGGAAGCACGATTT
GGAAAGCTCCGTGAGCACTAATTATACCCTGCCACTTGACTACGAAACGG
ACGCCCTGCGCCGGGAGTTGACACAGCTAGGGGCTCCGGTGGGTCCCATT
ACCAAAACAACTAAGCGGCTGTACATCAAGCAGCTAATCAAATACAAGCG
CAATACGGAGGCGCTGCTGGCCGCCCAAAAACACGCCCAGGATGCGCAGA
TCCGATACTCGGTAGAGCTTCATCGCACGCTGCGGTCGCCAGAGGACTTT
GCGAGGATCAATGATTACTTGCCGCATGAAGCAACCTCTGCAGCGCATTT
CGCACAGTGTGGGGTGACAAAAAAGAACATGCGAGAGGGGCACCTTAAAC
AGAGCTTCATCTACATGTTGATTGATCCACGCATTTCTCGGAATCTGCCT
GGGGAGAGCGCTTTTCTCGAAAAGTTCGGGGTTTGGCAGCGTTTTCTGGA
CTCCATTTTTTACATAGGCAAGGGTAAATGTTCGCGACCGTACGCTCACC
TTTACGATGCCATGCGGCAGCACACACGCCTTCACCAGAAGCGCGAAAAA
GATAAGACAAATAGGGAACGCGGCGGCGGATTCCGCACCCTACAGCCAGA
TGTTTTCCGCTCCCCTCCACCGGGAGATGGAAAGATGGGAAGCCGTAAGC
TGGAGCGCATCCTGGACATTTGGCAACATGGCAGTGGAGTCGTATGTCTT
CATGTCTTTCACAACATCTTGCCAATTGATGCATACACACGCGAAGCTTC
CATTATAGACGCTCTGGGCTTGAATCACCTTACCAATATAAAGCGCGGCG
ACTACTATGGGCCGGCTCAGTCTTGGACCATGAAACAGAAAAAGCAACTG
GGAATAGCGCTGCTTTTCAAGGCCATGCACATCTATCTGGCGGAGGGAGA
ATCACAGTTGTCGCCAAGCGACCTCCTCTGAAAGCTTTCTAGACCAT
BS30006.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:38:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8679-RA | 2115 | CG8679-PA | 1..2115 | 17..2131 | 10575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:38:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8679-RA | 2541 | CG8679-RA | 123..2237 | 17..2131 | 10575 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:37:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21216308..21218422 | 2131..17 | 10575 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:38:00 has no hits.
BS30006.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-18 15:34:42 Download gff for
BS30006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8679-RA | 106..2219 | 17..2130 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:41 Download gff for
BS30006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8679-RA | 123..2236 | 17..2130 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:48:06 Download gff for
BS30006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8679-RA | 123..2236 | 17..2130 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:48:06 Download gff for
BS30006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21216309..21218422 | 17..2130 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:41 Download gff for
BS30006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21216309..21218422 | 17..2130 | 100 | | Minus |
BS30006.pep Sequence
Translation from 16 to 2130
> BS30006.pep
MEQRANFLALTLLDALEDENEADIMSMLERNSINAGIVPCDRGLAPLHYV
CGMRNGGLAQRILERFLECPDLDVNALCDGQTTALHIASIYGRTELVRML
LERGACADLADEDNKLPVHYAIEECHFEVLQLLRDHIFRERQIQKKQQQR
VQVVDALTPNQPRYNHDVTSPYYINITHRRHRPQPKFPEPTEVECADIPP
LPDEESVNLFALTEAHLTQLIQSQRQNQPEDPCQPKRRTLIESWREKVER
SRARQSLFHQYDEHVEAMVDDAISQEDFNYKEHLQKKLRDEDNSKNLTED
APNSGRQVFEMLVEQVSQAVVVEPEPEHSFFTAQGDEVDVAESSARQDEY
FLQIKEAYVHTDDENGLVFYEARYLQNRDRREPVEQTPKERKHDLESSVS
TNYTLPLDYETDALRRELTQLGAPVGPITKTTKRLYIKQLIKYKRNTEAL
LAAQKHAQDAQIRYSVELHRTLRSPEDFARINDYLPHEATSAAHFAQCGV
TKKNMREGHLKQSFIYMLIDPRISRNLPGESAFLEKFGVWQRFLDSIFYI
GKGKCSRPYAHLYDAMRQHTRLHQKREKDKTNRERGGGFRTLQPDVFRSP
PPGDGKMGSRKLERILDIWQHGSGVVCLHVFHNILPIDAYTREASIIDAL
GLNHLTNIKRGDYYGPAQSWTMKQKKQLGIALLFKAMHIYLAEGESQLSP
SDLL*
BS30006.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:06:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8679-PA | 704 | CG8679-PA | 1..704 | 1..704 | 3700 | 100 | Plus |
| CG42391-PA | 253 | CG42391-PA | 22..243 | 438..700 | 343 | 35 | Plus |
