BS30012.complete Sequence
671 bp assembled on 2012-05-24
GenBank Submission: KX800991
> BS30012.complete
GAAGTTATCAGTCGACATGAGCCACTTGGGCCTTGCGGATGTGCACCAGT
CCGAGGATGCCACTCCTGACCTGGAATCCTTCACTGGCTTCGGCAACTCC
GCCGCCGAGGCCTTCATTCAAAGTCTCGCAGGAATGGTGAATCAGGGCGA
TGTGGAGACCATGATACGGGCTCAAAAGCAAATGCTGCAACGCTTTGAGA
AAACCAACGAGATGCTGCTCAACTGCAATGCCTTATCGCAGAGTCGTTTG
AAAAGTGCCAGCGAGGATTTCAAAAGACACGTGAAATGCCTGAGCGAAAT
GAAGAAGGATCTGGATTACATATTCCGCAAGATACGGATCATCAAGCAGA
AGCTACAGTCGCAGTTTCCCGCCATTTACGCCGAAGTTCAGCCGCAGCGT
AGCAGTTTGGCTGAGGAAGCCGAGGATGATACGGAAGCCCAGGCTAAAAA
GACTGCAGAAACACCTGCTCCTGCTGCCGCAAAACCTGTCCTATCCACCA
AGAAAAGTGCCGCCACCATAGAGTACGTGCAGATGGAGGAGGCAGTGGAC
AATGGCACTGTGGAGATCGAAAACGAGCTGATCAAGCGAGTTTGTTCCGT
GGAAACTGCCAATCCCAATGATTCCTCCGACTGCACATCCGAGGATACAG
GTTAAAAGCTTTCTAGACCAT
BS30012.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:27:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10681-RB | 639 | CG10681-PB | 1..639 | 17..655 | 3195 | 100 | Plus |
| CG10681-RA | 639 | CG10681-PA | 1..639 | 17..655 | 3195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:27:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10681-RB | 1027 | CG10681-RB | 217..855 | 17..655 | 3195 | 100 | Plus |
| CG10681-RA | 1023 | CG10681-RA | 213..851 | 17..655 | 3195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:27:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12502004..12502475 | 184..655 | 2360 | 100 | Plus |
| 3L | 28110227 | 3L | 12501781..12501948 | 17..184 | 840 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:27:50 has no hits.
BS30012.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:57:01 Download gff for
BS30012.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10681-RA | 213..849 | 17..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:53 Download gff for
BS30012.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10681-RA | 213..849 | 17..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:43:56 Download gff for
BS30012.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10681-RA | 213..849 | 17..653 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:43:56 Download gff for
BS30012.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12501781..12501947 | 17..183 | 100 | -> | Plus |
| 3L | 12502004..12502473 | 184..653 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:53 Download gff for
BS30012.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12494881..12495047 | 17..183 | 100 | -> | Plus |
| arm_3L | 12495104..12495573 | 184..653 | 100 | | Plus |
BS30012.pep Sequence
Translation from 16 to 654
> BS30012.pep
MSHLGLADVHQSEDATPDLESFTGFGNSAAEAFIQSLAGMVNQGDVETMI
RAQKQMLQRFEKTNEMLLNCNALSQSRLKSASEDFKRHVKCLSEMKKDLD
YIFRKIRIIKQKLQSQFPAIYAEVQPQRSSLAEEAEDDTEAQAKKTAETP
APAAAKPVLSTKKSAATIEYVQMEEAVDNGTVEIENELIKRVCSVETANP
NDSSDCTSEDTG*
BS30012.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:59:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10681-PB | 212 | CG10681-PB | 1..212 | 1..212 | 1062 | 100 | Plus |
| CG10681-PA | 212 | CG10681-PA | 1..212 | 1..212 | 1062 | 100 | Plus |
