Clone BS30026 Report

Search the DGRC for BS30026

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:300
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG10013-RA
Protein status:BS30026.pep: full length peptide match
Sequenced Size:1430

Clone Sequence Records

BS30026.complete Sequence

1430 bp assembled on 2012-06-18

GenBank Submission: KX800923

> BS30026.complete
GAAGTTATCAGTCGACATGTCGTTAGACCAAGTTATAATCAACTGCATGC
GCAGCAAGAACTGGATCAATGTCCTGCTCCTTAGATCGATGGATCTTTTC
CAACCCCTACTGGTCGAGAGTTCCAATGTGTCCCAATTGATAGAGGTCAG
CCCCAATGGGATCAGTTGGCACGAGAAGAACGTGGAGTACCGCATCATAA
TGGACGAGTTCTTCGATATAATCACCAGGACGAATGCTGGCGACGTGCCC
ATTACCTTAGTCGAAATGAAGGGTAGTCATGTGTCATTTGGATTATATCT
CCGTAGGATTAGGTACAGCATTTTGGATGCGCTCACCATTAATGTGGAAC
TGGGGGAGCTGCCAATGTGTATTTCCCCATACAATTCCTGTTCCCTGCAC
TGCAGCAACTGTACGAATGAAATCATTGGGCAAAGGCAGTATTATCATAT
CCAGGAGGTTCCGATAACGACCATCTTGCCGCAGAACTACTTCTGTCCCC
GCAACAGGATCCCAGTGTATCCTTCGGAGGAGGAGCTCTATTACGGCCTC
AACTATCTGGTCGTATGCTCCGAGCTGCTCGGCAACGGAGTCAAGACCAT
CGCAGGTCGTCGTCGCGTACTCTGCTCACGCTGCAAGAAGTGCGTAGGCG
AGTTTATTACCAGGGATGTGGGCGTGCAGCTGTACGCGGATGCCTTGCGA
TTTGTGACCTTGGACTCCCCACTCGAGTTCAAGGAGATCTTTGGCCATGT
GACACCCACCCAAATTATGATGCGCCTGGTGAACGACGGCGAAATCTGTG
GCCCGGATCAGAGACGCCTCTTCCTCAAGGCCGTGCGTCCGGATGGTCAG
TTGCAGTTATTGCACTTGGAGATGGATACCAAGCAGATGCACATTCTGCG
CTCCGAGCTGAAGTTGCCCGACATTAAAAAACCTGATATAGACTTACCCA
TGGAGGTCGATACCAGCAGCGAAAGTGATGTGGACATGAATGTGAGCGAT
ACGAGCAGCAGCAACTCCATGCCCCAAACAGGAGATGAAGAATTAGCTCC
AACACCCAGATCCACTACCCCCAGAGGAACTCCTACAAAGACCGTGCAAT
ATGTGCGGTTGCGTGGCTTTCGTGGCTGGCGCGTTAGGTACCTGTTCTCG
GGAAGTGATCGCGATCTGATCGAACACGACGATGTCTATATAAACTGGAC
CGATGAGGGAACCCGCCTTTTGTACATCTCCCACTTGATGATGGCAGACC
TCCTAAGCGAGTTCAATGCCAATGAGAACCTTGTGGCCAGTTTGGAGAAG
AAGCCGCTACCCACCAGGACTGATAATCCCCGGCAAAGCTGCATTATCTG
CGAGTCTGATAAAGAGTTCTATGCCAGGTACGAGCGACTTGCCAAGATTT
CTCAAGAGGGATGAAAGCTTTCTAGACCAT

BS30026.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:37:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG10013-RA 1398 CG10013-PA 1..1398 17..1414 6990 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:37:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG10013-RA 1690 CG10013-RA 131..1529 17..1415 6995 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:36:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12323651..12325049 17..1415 6995 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:36:58 has no hits.

BS30026.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-18 15:34:33 Download gff for BS30026.complete
Subject Subject Range Query Range Percent Splice Strand
CG10013-RA 129..1525 17..1413 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:18 Download gff for BS30026.complete
Subject Subject Range Query Range Percent Splice Strand
CG10013-RA 131..1527 17..1413 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:47:49 Download gff for BS30026.complete
Subject Subject Range Query Range Percent Splice Strand
CG10013-RA 131..1527 17..1413 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:47:49 Download gff for BS30026.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12323651..12325047 17..1413 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:18 Download gff for BS30026.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8149373..8150769 17..1413 100   Plus

BS30026.pep Sequence

Translation from 16 to 1413

> BS30026.pep
MSLDQVIINCMRSKNWINVLLLRSMDLFQPLLVESSNVSQLIEVSPNGIS
WHEKNVEYRIIMDEFFDIITRTNAGDVPITLVEMKGSHVSFGLYLRRIRY
SILDALTINVELGELPMCISPYNSCSLHCSNCTNEIIGQRQYYHIQEVPI
TTILPQNYFCPRNRIPVYPSEEELYYGLNYLVVCSELLGNGVKTIAGRRR
VLCSRCKKCVGEFITRDVGVQLYADALRFVTLDSPLEFKEIFGHVTPTQI
MMRLVNDGEICGPDQRRLFLKAVRPDGQLQLLHLEMDTKQMHILRSELKL
PDIKKPDIDLPMEVDTSSESDVDMNVSDTSSSNSMPQTGDEELAPTPRST
TPRGTPTKTVQYVRLRGFRGWRVRYLFSGSDRDLIEHDDVYINWTDEGTR
LLYISHLMMADLLSEFNANENLVASLEKKPLPTRTDNPRQSCIICESDKE
FYARYERLAKISQEG*

BS30026.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:05:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG10013-PA 465 CG10013-PA 1..465 1..465 2438 100 Plus
CG7326-PB 482 CG7326-PB 89..312 84..295 172 22 Plus
CG7326-PA 482 CG7326-PA 89..312 84..295 172 22 Plus