BS30095.complete Sequence
695 bp assembled on 2012-05-24
GenBank Submission: KX803880
> BS30095.complete
GAAGTTATCAGTCGACATGAAAGCTTTCATTATCGCCGGAGTGTGCGTGT
TGAGCGTGCTGAGCCTGGGATCCGCTCAGTTCCAGAACGGACGTCTGGAG
CCGCCGAATCCGCAGCTCTGTGCCCAGCGTGTCATTCACGAGAAGACTCC
CGATGGCAAGGGTTACTTCTTCTCGTGGCGCGACCCTCAGCTGAAGGGCG
TGGAGGAGGACTGGCTGACCGCCAGGAACTACTGCCGCAGGCGCTGCATG
GACTCCGTTTCCCTGGAGACCAGTTTGGAGAACGAGTGGATCAAGCAGTA
TGTTGTGCGCGAGAATGTGAAATACATCTGGACCAGCGGCCGCTTGTGTG
ACTTCAAGGGCTGTGACCGCCCCGATCTGCAGCCCACAAACATCAACGGT
TGGTTCTGGACCGCCACACTGCAGAAACTGGCACCAACCACTGAGAGGAA
CCAGGGCGATTGGTCGCCCACCGGAGGCATTGGCCTGCCCCAGCCGGACA
ACCGCGAGTACAAGCAGAATGGAGCGCCGGAGAATTGTCTCGCCCTGCTG
AATCAGTTCTACAACGATGGCGTAAACTGGCACGATGTGGCATGCCATCA
CAAGAAGAGCTTCGTCTGCGAGGAGAACGATGCTCTGCTGAAGTATGTGC
GCTACACGAACCCCAATCTGCGCATCTAAAAGCTTTCTAGACCAT
BS30095.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:28:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4115-RA | 663 | CG4115-PA | 1..663 | 17..679 | 3315 | 100 | Plus |
| CG6055-RB | 660 | CG6055-PB | 185..254 | 201..270 | 185 | 84.3 | Plus |
| CG6055-RA | 660 | CG6055-PA | 185..254 | 201..270 | 185 | 84.3 | Plus |
| CG6055-RB | 660 | CG6055-PB | 538..648 | 557..667 | 180 | 77.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:28:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4115-RA | 1115 | CG4115-RA | 123..785 | 17..679 | 3315 | 100 | Plus |
| CG6055-RB | 1034 | CG6055-RB | 271..340 | 201..270 | 185 | 84.3 | Plus |
| CG6055-RA | 1087 | CG6055-RA | 324..393 | 201..270 | 185 | 84.3 | Plus |
| CG6055-RB | 1034 | CG6055-RB | 624..734 | 557..667 | 180 | 77.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:28:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12362563..12362925 | 317..679 | 1815 | 100 | Plus |
| 3R | 32079331 | 3R | 12360336..12360492 | 162..318 | 785 | 100 | Plus |
| 3R | 32079331 | 3R | 12360130..12360275 | 17..162 | 730 | 100 | Plus |
| 2L | 23513712 | 2L | 7471730..7471799 | 201..270 | 185 | 84.3 | Plus |
| 2L | 23513712 | 2L | 7472083..7472193 | 557..667 | 180 | 77.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:28:10 has no hits.
BS30095.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-24 16:57:04 Download gff for
BS30095.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4115-RA | 120..780 | 17..677 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:02 Download gff for
BS30095.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4115-RA | 120..780 | 17..677 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:44:06 Download gff for
BS30095.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4115-RA | 123..783 | 17..677 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:44:06 Download gff for
BS30095.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12360130..12360275 | 17..162 | 100 | -> | Plus |
| 3R | 12360337..12360490 | 163..316 | 100 | -> | Plus |
| 3R | 12362563..12362923 | 317..677 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:02 Download gff for
BS30095.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8185852..8185997 | 17..162 | 100 | -> | Plus |
| arm_3R | 8186059..8186212 | 163..316 | 100 | -> | Plus |
| arm_3R | 8188285..8188645 | 317..677 | 100 | | Plus |
BS30095.pep Sequence
Translation from 16 to 678
> BS30095.pep
MKAFIIAGVCVLSVLSLGSAQFQNGRLEPPNPQLCAQRVIHEKTPDGKGY
FFSWRDPQLKGVEEDWLTARNYCRRRCMDSVSLETSLENEWIKQYVVREN
VKYIWTSGRLCDFKGCDRPDLQPTNINGWFWTATLQKLAPTTERNQGDWS
PTGGIGLPQPDNREYKQNGAPENCLALLNQFYNDGVNWHDVACHHKKSFV
CEENDALLKYVRYTNPNLRI*
BS30095.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:59:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4115-PA | 220 | CG4115-PA | 1..220 | 1..220 | 1228 | 100 | Plus |
| CG6055-PB | 219 | CG6055-PB | 22..219 | 26..220 | 666 | 59.3 | Plus |
| CG6055-PA | 219 | CG6055-PA | 22..219 | 26..220 | 666 | 59.3 | Plus |
| Clect27-PB | 231 | CG3244-PB | 10..231 | 4..220 | 498 | 44.4 | Plus |
| Clect27-PA | 231 | CG3244-PA | 10..231 | 4..220 | 498 | 44.4 | Plus |
