BS30110.complete Sequence
2687 bp assembled on 2012-10-15
GenBank Submission: KX800352
> BS30110.complete
GAAGTTATCAGTCGACATGACTTCCGATATCGCCATGCAATTGATTGCCA
TTTTGGAAAAGACGGTGTCGCCAGACAAAAATGAGCTGCTATCGGCGAAG
AACTTTCTGGAGCAGGCGGCGGCCAGCAACCTGCCCGAGTTTCTCAAGGC
GCTGTCAGAGATACTGGTGAACACGGCCAACAGTGCGGTGGCGCGAATGG
CAGCCGGTCTCCAGCTGAAGAACCACCTGACCAGCAAGGACGAGAAGGTC
AGCCAACAGTACCAGGACCGCTGGCATCAGTTTCCCAGCGAGATCCGCGA
GTTGATCAAGAATAACATCCTGGCTGCTTTGGGTACCGAGAACACCCGAC
CCTCCTGCGCCGCCCAGTGCGTGGCCTATGTGGCCGTGATTGAGCTGCCG
ATAAACCGCTGGCCCATGCTCATCCAGACACTGGTGAACAAGGTGGTCAG
CGAAGGATCCAGCGAGATGCATCGCGAGTCGGCGCTGGAGGCCATTGGCT
ACATTTGCCAGGACATTCGTTTCGGCGTCATGGAGAACCAGTCGAACGAT
GTGCTGACTGCTATTATTCACGGCATGAGAAAGGTAGAGCCGAGCAATCA
TGTACGCTTGGCGGCCACCACGGCCCTTCACAACTCGTTGGAGTTCACCA
AATCGAACTTTGAGAAGGACATGGAGCGCAACTTCATCATGGAGGTGGTG
TGCGAGGCCACTCAGTGCCAGGACTCGCAAATCTGCGTTGCCGCTCTGCA
GTGCCTGGTGAAGATTATGACCCTTTATTACCAGTACATGGAGCCCTACA
TGGCACAGGCTCTTTTCCCTATCACTTTGGCGGCCATGAAGTCTGATAAC
GATGCTGTAGCGCTGCAGGGCATAGAGTTCTGGTCGAACGTCTGCGATGA
GGAGATAGATCTGGCCATCGAAAGCCAGGAGGCCACTGATCAGGGCCGCG
CTCCGCAGAGAGTGTCCAAGCACTATGCTCGAGGTGCTCTGCAGTTCCTG
ACGCCTGTGCTCGTCGAGAAATTAACCAAGCAGGACGAGTGCGATGACGA
GGACACCTGGAGCCCGGCGAAGGCCGCCTCCGTTTGCCTCATGGTGCTGG
CCACATGTTGCGAGGACGAGATCGTGCCACATGTGCTTCCCTTCATCAAG
GAGAACATCGAGTCACCTAATTGGCGATTCCGCGACGCAGCGGTAATGAC
TTTCGGCTCCGTGCTGAATGGATTGGAGACCAATACCTTAAAGCCGCTCG
TGGAGCAAGCCATGCCCACGCTCATTCGACTGATGTACGACTCCAGCGTT
ATCGTGCGCGATACCATCGCCTGGACCTTCGGACGTATTTGCGATATAAT
TCCCGAGGCGGCTATCAACGAGACATATCTTCAAACGCTTTTGGAGTGCT
TCGTGAAGAGCCTAAAGTCAGAGCCGCGTGTAGCAGCCAACGTGTGTTGG
GCCTTCATTGGACTTTCCGATGCAGCTTGGGAGGCAGCGGTCACCAACGA
CGGAGAGACTCCGGAGACGTACGCCCTGTCCCCGTACTTTGAGTACATCA
TTACCCAGCTGCTGGAGACCACTGATCGATCGGACGGAGCTCAAGCCAAT
TTGCGATGTGCTGCTTATCAGGCACTTATGGATATGATCAAGAACTCTCC
CTTGGATTGCTACTTGGTGGTCCAGCGCACCACGCTGGTGATTTTGGAGC
GCTTGAACCAGGTGATGCAGATGGAAACGCAGATTAACAATCACAGCGAT
CGTCATCAGTTCAACGATCTACAATCGCTTCTGTGCGCCACTCTGCAAAG
CGTTTTGAGAAAGGTCCACGAGCAGGATGCGCCTCAAATTTCCGATGCCA
TTATGACCGCTCTGCTGACCATGTTCAATTCAAGTGCTGGAAAGTCGGGT
GTAGTGCAGGAGGAGGCCTTCCTTGCCGTTTCGACATTGGTTGAGCTTTT
GGGAGCTCAGTTCGCCAAGTACATGCCCGCTTTCAAGGACTTCCTCGTCA
TGGGTCTGAAGAACTTCCAGGAGTACCAGGTCTGCTGCGCAGCTGTTGGT
CTCACCGGCGACATTTTCCGCGCCCTTAAGGACCTAATGGTGCCCTATTC
CAATGAAATTATGACCGTATTGATAAACAATCTAACGGAGCCGACTATCC
ATCGAACCGTCAAGCCCCAGGTTCTGTCTGCTTTCGGAGATATTGCGTTG
AGCATTGGCAACCACTTCCTGCCATATTTGAGCATGGTCCTAGATATGTT
GCGCGTTGCGTCCAATCTGCAGACGGACGCCAACAACTTCGATATGAACG
AATACATCAACGAGCTGCGTGAAAGCATCCTTGAAGCCTACACTGGCATC
ATCCAGGGCCTTAAGGGCGTTGACCAGACTGCCCATACAGACGTTATGCA
CATGGAGCCCCACCTGATGCACATTATTTCGTTCATCAAGCGCATCGCTC
AGGAGGGCGACGTGTCCGACTCAATGTTGGCCAGTGCCGCTGGCTTCATT
GGCGATCTGTGCACTTCGTTTGGTCCGCGGCTATACCCGCTGCTGGATGA
TGCCATCATTACCCAATTCCTTGCCGAGGGCAAGCGCTCCAAGGCGCAGC
GCACCAAGATGCTGTGCACCTGGGCCGTCAAAGAGATAAAAAAAATCAAT
ACCCAGGTCATCACGCAGTAGAAGCTTTCTAGACCAT
BS30110.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:38:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fs(2)Ket-RE | 2655 | CG2637-PE | 1..2655 | 17..2671 | 13200 | 99.8 | Plus |
| Fs(2)Ket-RC | 2655 | CG2637-PC | 1..2655 | 17..2671 | 13200 | 99.8 | Plus |
| Fs(2)Ket-RB | 2655 | CG2637-PB | 1..2655 | 17..2671 | 13200 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:38:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fs(2)Ket-RE | 4699 | CG2637-RE | 298..2955 | 14..2671 | 13215 | 99.8 | Plus |
| Fs(2)Ket-RC | 5571 | CG2637-RC | 298..2955 | 14..2671 | 13215 | 99.8 | Plus |
| Fs(2)Ket-RB | 3783 | CG2637-RB | 480..3137 | 14..2671 | 13215 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:38:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20736418..20737446 | 317..1345 | 5115 | 99.8 | Plus |
| 2L | 23513712 | 2L | 20737515..20738441 | 1346..2272 | 4605 | 99.8 | Plus |
| 2L | 23513712 | 2L | 20738501..20738902 | 2270..2671 | 2010 | 100 | Plus |
| 2L | 23513712 | 2L | 20736100..20736344 | 72..316 | 1210 | 99.6 | Plus |
| 2L | 23513712 | 2L | 20735370..20735430 | 14..74 | 305 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 12:38:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rt1a | 5108 | Rt1a DME278684 5108bp Derived from AJ278684 (AJ278684.1) (Rel. 64, Last updated, Version 1). | 2928..2980 | 2518..2465 | 132 | 74.1 | Minus |
BS30110.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-15 10:05:13 Download gff for
BS30110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fs(2)Ket-RA | 297..2951 | 17..2671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:56:03 Download gff for
BS30110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fs(2)Ket-RB | 483..3137 | 17..2671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:08:31 Download gff for
BS30110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fs(2)Ket-RB | 483..3137 | 17..2671 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:08:31 Download gff for
BS30110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20736103..20736344 | 75..316 | 99 | -> | Plus |
| 2L | 20735373..20735430 | 17..74 | 100 | -> | Plus |
| 2L | 20736418..20737446 | 317..1345 | 99 | -> | Plus |
| 2L | 20737515..20738441 | 1346..2272 | 99 | -> | Plus |
| 2L | 20738504..20738902 | 2273..2671 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:56:03 Download gff for
BS30110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20735373..20735430 | 17..74 | 100 | -> | Plus |
| arm_2L | 20736103..20736344 | 75..316 | 99 | -> | Plus |
| arm_2L | 20736418..20737446 | 317..1345 | 99 | -> | Plus |
| arm_2L | 20737515..20738441 | 1346..2272 | 99 | -> | Plus |
| arm_2L | 20738504..20738902 | 2273..2671 | 100 | | Plus |
BS30110.pep Sequence
Translation from 16 to 2670
> BS30110.pep
MTSDIAMQLIAILEKTVSPDKNELLSAKNFLEQAAASNLPEFLKALSEIL
VNTANSAVARMAAGLQLKNHLTSKDEKVSQQYQDRWHQFPSEIRELIKNN
ILAALGTENTRPSCAAQCVAYVAVIELPINRWPMLIQTLVNKVVSEGSSE
MHRESALEAIGYICQDIRFGVMENQSNDVLTAIIHGMRKVEPSNHVRLAA
TTALHNSLEFTKSNFEKDMERNFIMEVVCEATQCQDSQICVAALQCLVKI
MTLYYQYMEPYMAQALFPITLAAMKSDNDAVALQGIEFWSNVCDEEIDLA
IESQEATDQGRAPQRVSKHYARGALQFLTPVLVEKLTKQDECDDEDTWSP
AKAASVCLMVLATCCEDEIVPHVLPFIKENIESPNWRFRDAAVMTFGSVL
NGLETNTLKPLVEQAMPTLIRLMYDSSVIVRDTIAWTFGRICDIIPEAAI
NETYLQTLLECFVKSLKSEPRVAANVCWAFIGLSDAAWEAAVTNDGETPE
TYALSPYFEYIITQLLETTDRSDGAQANLRCAAYQALMDMIKNSPLDCYL
VVQRTTLVILERLNQVMQMETQINNHSDRHQFNDLQSLLCATLQSVLRKV
HEQDAPQISDAIMTALLTMFNSSAGKSGVVQEEAFLAVSTLVELLGAQFA
KYMPAFKDFLVMGLKNFQEYQVCCAAVGLTGDIFRALKDLMVPYSNEIMT
VLINNLTEPTIHRTVKPQVLSAFGDIALSIGNHFLPYLSMVLDMLRVASN
LQTDANNFDMNEYINELRESILEAYTGIIQGLKGVDQTAHTDVMHMEPHL
MHIISFIKRIAQEGDVSDSMLASAAGFIGDLCTSFGPRLYPLLDDAIITQ
FLAEGKRSKAQRTKMLCTWAVKEIKKINTQVITQ*
BS30110.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:57:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fs(2)Ket-PE | 884 | CG2637-PE | 1..884 | 1..884 | 4515 | 100 | Plus |
| Fs(2)Ket-PC | 884 | CG2637-PC | 1..884 | 1..884 | 4515 | 100 | Plus |
| Fs(2)Ket-PB | 884 | CG2637-PB | 1..884 | 1..884 | 4515 | 100 | Plus |
| Fs(2)Ket-PA | 884 | CG2637-PA | 1..884 | 1..884 | 4515 | 100 | Plus |
| Fs(2)Ket-PD | 884 | CG2637-PD | 1..884 | 1..884 | 4515 | 100 | Plus |
