BS30148.complete Sequence
4115 bp assembled on 2012-09-28
GenBank Submission: KX804314
> BS30148.complete
GAAGTTATCAGTCGACATGAAGGCGGCGGAAATCAAGCGAGATCTCACAA
ACATCCAGAAGTCCATGTCGGAAATCAACGATCTGGCCAAGGAGCGGATC
ACCGGCGGACCTGGATCCATTAGCACCACCTCAGCCTCGGCGATCACAGC
ACCCAGCACGATGTCCCAGACGACGACGAGCCGGCTGGCACCCAAACTCA
CATCCGCCCATCCGTCAATCGACGATCTCAGGGGTCTCAGTAGGCAGGAC
AAAATCACCCAGCTGCAAAAAAAAATTCGCGCCTCGTTCGAGAACCTGGT
GGACCACGATGACAGCAATGTGATCGTGACCCTGCCGGATGACGACGACT
GCCCGCATAACCATTTTGGCAGCGGCCTCAACCTTACCCATCCCACCGCC
GCCCAGCTGAGTGCTAGTGGGCTGAGCGGGTCGAGTAAGACAATCGACAC
GATTAAGTTCCAGGAGAAGAGCATGAAGACCGAGTCCAAGACCAAGGTGG
TCACCGATGGCTTCAGTTCCGAGCAGGCCACTAGCAATTCGGCGGAGATG
AAACGTTTGCAGGCCGGAGATATAGACTATCAAGAAAGCAAGGGTGCGTC
GGCGATGAGAAATCGATTGGAGGTGGATGGGGTCAAAACGGAGGAGAATG
CAGCCGTCATTAAGGAAGCCCTCTCACTCCGCACCGGCGACATCACACAG
CAGGCGAGCAACAATGTGGCGGCCTCCAGTATTACGGTGCAAAGTGAGAA
TTTCTCCGCGGACAAGAAGGCGATATCCCAGTCGCAGCAATCGCAGACGA
TGACCTCCAACGGGATCATCAGTCAGGAGAAACATGTATCCTCCGCCTCG
CAGGCCAACTACTCGATGTCGCACAAGGGCGTTTCCAGTACCGGCAGTAG
CATGATCACCAGCTCCTCGCAAATGTCCGCGATGAATGGCCAGATGCTGA
AGCTCGCCGATCTCAAGTTGGATGACCTCAAGTCGCTGACAGCTGGCAGT
GGGCAGCAGGAGATCGAGCAGACCATCAACAAGTATTCCAATATGCTGAC
CTCAATAGTGAGCTCCCTGCAAGAAGATGAGCGAGGTGGTAGTGCCATAA
CCGTCCACGATGTTGGTGGCAAGAAGTCTCAGTACCTGGAGAAGATCAAC
GAAGTCATTCGTCGAGCTTGGGCAGTGCCCACACATGGCCACGAGCTGGG
CTACTCATTGTGCAATTCCCTGCGCCAAAGTGGCGGCCTCGATCTTCTCA
TGAAGAACTGCGTTAAGCCCGATCTCCAGTTTTCCTCCGCACAGCTTCTT
GAGCAGTGCCTAACCACCGAGAACCGCAAACATGTGGTGGATAATGGTCT
GGATAAGGTGGTCAATGTGGCCTGTGTCTGCACAAAGAATTCCAATATGG
AGCACTCCCGCGTGGGCACTGGCATCCTGGAGCATCTGTTCAAACACTCC
GAGGGCACCTGTTCGGATGTGATAAGGCTAGGTGGTCTGGATGCCGTGCT
CTTTGAGTGCCGCACCAGTGATTTGGAAACTCTGCGACACTGCGCTAGTG
CACTGGCAAATTTATCTCTATATGGTGGAGCCGAGAATCAGGAGGAGATG
ATCCTACGCAAGGTGCCCATGTGGTTGTTCCCATTGGCCTTCCACAACGA
TGATAACATCAAGTACTATGCCTGCTTGGCCATTGCAGTGCTGGTAGCCA
ACAAGGAGATTGAAGCCGAGGTGCTGAAGTCTGGATGCTTGGATTTGGTG
GAACCCTTTGTCACCTCCCACGACCCCTCGGCTTTTGCGAGATCCAATCT
GGCACATGCCCACGGGCAAAGCAAACATTGGCTGAAAAGATTGGTTCCAG
TTTTGAGTTCCAATCGCGAAGAGGCCCGCAATCTGGCTGCCTTCCATTTT
TGCATGGAGGCGGGCATCAAGAGGGAGCAGGGTAACACCGACATCTTCCG
CGAGATCAACGCTATTGAAGCTTTGAAAAATGTGGCCAGCTGTCCAAATG
CCATTGCATCCAAGTTCGCCGCTCAGGCTCTGAGATTGATTGGAGAGACA
GTTCCGCACAAGCTGTCCCAACAGGTTCCCTTGTGGTCCGTGGAGGATGT
GCAGGAGTGGGTAAAGCAAATCGGTTTCAATGACTACATCGACAAGTTCA
ACGAGTCCCAGGTGGACGGGGATCTTTTACTGAAGCTCAATCAGGATAAC
CTCCGGGCTGATATTGGAATCGGTAATGGAATACTTCTAAAGCGTTTTGA
ACGCGAGCTGCAAAATCTCAAGCGTATGGCTGACTACTCATCCAAGGACA
CGGCCAAGATGCACCAATTTCTCTCGGAGATCGGTACTGATTACTGCACC
TACACGTATGCCATGCTGAATGCTGGAATTGACAAGTGTGCACTGCCGCA
TGTCAATGAGGATATGCTGATGACAGAGTGTGGCATCCACAACTCGATCC
ATCGTCTGAGAATTCTCAATGCGGTCAAAAACTTGGAGAATTCGCTGCCC
AGCTCGTCGGAGGAGAACATGGCCAAGACGCTAGATGTTTTCGTTAGCTA
TAGGCGATCAAACGGCTCCCAACTAGCCAGTCTTCTCAAGGTGCATCTGC
AGCTTCGTGGTTTCTCCGTTTTCATCGACGTGGAGCGCCTGGAGGCGGGC
AAATTTGACAACGGCCTATTGAACAGTATTCGACAGGCAAAGAACTTTGT
CTTAGTATTAACTCCCGATGCCCTGCACCGCTGCATTAACGACGAGGACT
GCAAGGACTGGGTGCATCGCGAAATCGTGGCTGCCCTGAACTCGAACTGC
AACATTATACCCATCATAGACCAGCAATTCGATTGGCCCGAGGTGGAGCG
ACTTCCCGAGGACATGCGCAGTGTGGCCCATTTTAACGGTGTTAATTGGA
TCCACGACTACCAGGACGCATGCATCGATAAGCTCGAAAGATTTTTGCGC
GGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCGGCACCCCCGG
TTCGGTCTCATACCAAAGAATGCACAGCAACGACTCCGACTACCAGAGCG
GAGGAGCAGGCGCCGGATCAGGAGCAGGAACTGGAGGAGGAGGTGGTGGC
GGCGTTACGGGCAGTGTGGTGGATGGCCTGATGGTGGCGGCCAATGGCAG
CGGACAAGCTAATCACCAGGCAAATAGGTACCGCCAATCTCCCTCACCGG
CCCGCCAAAGGGGCAGCACCTCGCAGTTGAGTGGTTATTCTCGGGCGCCC
TCGAAACGCTCCCAAATCCTCACCCCGTATCGCACCCAACAGGCAGCCCT
GCTCCACAAAACCGGAGCGGGTTCCGCGTCCATGCAGAATATGATGCCAT
TGGCGTATCTGCCTCCGCGGAGGAGTTCCGCCGCGGGATTAGGTCATGGA
TCTGGTTCCGGCATGGGCAGTGGCTATCGATCGCACAGTGTGGATGGGCT
TCTAGATCAGGCGGGCTCAACTCCAGAGCAAAGAATAGCAGCAGCTGCGG
CCAAGGTGACAGCGGGTAGTACAGCTCTAACGAACGCCAGTTCCACAAGC
ACTCTGCAGCCCGAAGAAGAGGTGACGGATGCCGCCCTCAATGACTCGGT
GACCCGGCGTGACAAGCATACTTTATCCCCACCGGGAAATGTACAGCAGC
ACAGAAAGTCCCGAAGTCTGGATCATATTCTCAGCAAACAGACTTTAGCA
GAGCTGCTTCCACCGAGTAGCGAACTCGCAGATGGAACGCAAAGTATGCA
AAACCTGGCCATTCCAATGACCCCGCAGCCCCAACGAAGGGACACCAGCT
CCTCCTCGAAATCCCCCACTCCCGAAAGACCTCCGCAACCAGCGATGGAA
AGGGTAAGGGAACGCCAGAGTCCTGAGGGTGTGAGTGCGACGGAAAGCGA
GCGGGAGGATCAGCCAGAAGAATGTCTGCGACATGGCAACCAACAGAGGG
CATCTGCCTCGGTTCATCGGGGAGCCAGTTTGACCAGCAACAAGACCTCC
AACTCCTCACTGGGCTCCAACTTTAGTGCCGGAGGAAACAACAAGACGAT
ATTTAATCGAACGATGAAGAAGGTCCGCTCGCTGATAAAAAAACCATAAA
AGCTTTCTAGACCAT
BS30148.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:21:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ect4-RF | 4083 | CG43119-PF | 1..4083 | 17..4099 | 20415 | 100 | Plus |
| Ect4-RK | 5115 | CG43119-PK | 1033..5115 | 17..4099 | 20415 | 100 | Plus |
| Ect4-RI | 5193 | CG43119-PI | 1033..5108 | 17..4092 | 20380 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:21:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ect4-RF | 5071 | CG43119-RF | 775..4861 | 17..4103 | 20435 | 100 | Plus |
| Ect4-RK | 6177 | CG43119-RK | 1881..5967 | 17..4103 | 20435 | 100 | Plus |
| Ect4-RI | 6741 | CG43119-RI | 2468..6543 | 17..4092 | 20380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:21:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8102891..8104822 | 663..2594 | 9660 | 100 | Plus |
| 3L | 28110227 | 3L | 8106014..8106949 | 3157..4092 | 4680 | 100 | Plus |
| 3L | 28110227 | 3L | 8099146..8099537 | 274..665 | 1960 | 100 | Plus |
| 3L | 28110227 | 3L | 8098469..8098725 | 17..273 | 1285 | 100 | Plus |
| 3L | 28110227 | 3L | 8105438..8105657 | 2939..3158 | 1100 | 100 | Plus |
| 3L | 28110227 | 3L | 8104878..8105060 | 2589..2771 | 915 | 100 | Plus |
| 3L | 28110227 | 3L | 8105127..8105296 | 2771..2940 | 850 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:21:35 has no hits.
BS30148.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-28 18:20:23 Download gff for
BS30148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ect4-RF | 681..4748 | 17..4084 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:51 Download gff for
BS30148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ect4-RK | 1881..5948 | 17..4084 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:02:35 Download gff for
BS30148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ect4-RK | 1881..5948 | 17..4084 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:02:35 Download gff for
BS30148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8106016..8106941 | 3159..4084 | 100 | | Plus |
| 3L | 8098469..8098725 | 17..273 | 100 | -> | Plus |
| 3L | 8099146..8099536 | 274..664 | 100 | -> | Plus |
| 3L | 8102893..8104818 | 665..2590 | 100 | -> | Plus |
| 3L | 8104880..8105059 | 2591..2770 | 100 | -> | Plus |
| 3L | 8105127..8105296 | 2771..2940 | 100 | -> | Plus |
| 3L | 8105440..8105657 | 2941..3158 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:51 Download gff for
BS30148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8091569..8091825 | 17..273 | 100 | -> | Plus |
| arm_3L | 8092246..8092636 | 274..664 | 100 | -> | Plus |
| arm_3L | 8095993..8097918 | 665..2590 | 100 | -> | Plus |
| arm_3L | 8097980..8098159 | 2591..2770 | 100 | -> | Plus |
| arm_3L | 8098227..8098396 | 2771..2940 | 100 | -> | Plus |
| arm_3L | 8098540..8098757 | 2941..3158 | 100 | -> | Plus |
| arm_3L | 8099116..8100041 | 3159..4084 | 100 | | Plus |
BS30148.pep Sequence
Translation from 16 to 4098
> BS30148.pep
MKAAEIKRDLTNIQKSMSEINDLAKERITGGPGSISTTSASAITAPSTMS
QTTTSRLAPKLTSAHPSIDDLRGLSRQDKITQLQKKIRASFENLVDHDDS
NVIVTLPDDDDCPHNHFGSGLNLTHPTAAQLSASGLSGSSKTIDTIKFQE
KSMKTESKTKVVTDGFSSEQATSNSAEMKRLQAGDIDYQESKGASAMRNR
LEVDGVKTEENAAVIKEALSLRTGDITQQASNNVAASSITVQSENFSADK
KAISQSQQSQTMTSNGIISQEKHVSSASQANYSMSHKGVSSTGSSMITSS
SQMSAMNGQMLKLADLKLDDLKSLTAGSGQQEIEQTINKYSNMLTSIVSS
LQEDERGGSAITVHDVGGKKSQYLEKINEVIRRAWAVPTHGHELGYSLCN
SLRQSGGLDLLMKNCVKPDLQFSSAQLLEQCLTTENRKHVVDNGLDKVVN
VACVCTKNSNMEHSRVGTGILEHLFKHSEGTCSDVIRLGGLDAVLFECRT
SDLETLRHCASALANLSLYGGAENQEEMILRKVPMWLFPLAFHNDDNIKY
YACLAIAVLVANKEIEAEVLKSGCLDLVEPFVTSHDPSAFARSNLAHAHG
QSKHWLKRLVPVLSSNREEARNLAAFHFCMEAGIKREQGNTDIFREINAI
EALKNVASCPNAIASKFAAQALRLIGETVPHKLSQQVPLWSVEDVQEWVK
QIGFNDYIDKFNESQVDGDLLLKLNQDNLRADIGIGNGILLKRFERELQN
LKRMADYSSKDTAKMHQFLSEIGTDYCTYTYAMLNAGIDKCALPHVNEDM
LMTECGIHNSIHRLRILNAVKNLENSLPSSSEENMAKTLDVFVSYRRSNG
SQLASLLKVHLQLRGFSVFIDVERLEAGKFDNGLLNSIRQAKNFVLVLTP
DALHRCINDEDCKDWVHREIVAALNSNCNIIPIIDQQFDWPEVERLPEDM
RSVAHFNGVNWIHDYQDACIDKLERFLRGEKNIDRIAAMVPGTPGSVSYQ
RMHSNDSDYQSGGAGAGSGAGTGGGGGGGVTGSVVDGLMVAANGSGQANH
QANRYRQSPSPARQRGSTSQLSGYSRAPSKRSQILTPYRTQQAALLHKTG
AGSASMQNMMPLAYLPPRRSSAAGLGHGSGSGMGSGYRSHSVDGLLDQAG
STPEQRIAAAAAKVTAGSTALTNASSTSTLQPEEEVTDAALNDSVTRRDK
HTLSPPGNVQQHRKSRSLDHILSKQTLAELLPPSSELADGTQSMQNLAIP
MTPQPQRRDTSSSSKSPTPERPPQPAMERVRERQSPEGVSATESEREDQP
EECLRHGNQQRASASVHRGASLTSNKTSNSSLGSNFSAGGNNKTIFNRTM
KKVRSLIKKP*
BS30148.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:51:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ect4-PF | 1360 | CG34373-PF | 1..1360 | 1..1360 | 6941 | 100 | Plus |
| Ect4-PK | 1704 | CG43119-PK | 345..1704 | 1..1360 | 6941 | 100 | Plus |
| Ect4-PI | 1730 | CG43119-PI | 345..1702 | 1..1358 | 6929 | 100 | Plus |
| Ect4-PH | 1386 | CG34373-PH | 1..1358 | 1..1358 | 6929 | 100 | Plus |
| Ect4-PG | 1562 | CG34373-PG | 177..1534 | 1..1358 | 6929 | 100 | Plus |
