BS30163.complete Sequence
821 bp assembled on 2012-08-22
GenBank Submission: KX806188
> BS30163.complete
GAAGTTATCAGTCGACATGACTGAGCGCGAGAACAATGTGTACAAGGCAA
AGCTGGCCGAACAGGCCGAGCGCTACGACGAAATGGTGGAGGCCATGAAG
AAGGTCGCCTCCATGGACGTAGAGCTGACCGTCGAGGAGCGAAATCTGCT
GTCGGTGGCGTACAAGAATGTGATTGGAGCACGCCGTGCCTCGTGGCGCA
TCATCACCTCGATCGAACAGAAGGAGGAGAACAAGGGGGCCGAGGAGAAA
TTGGAGATGATCAAAACCTACCGCGGACAGGTGGAGAAGGAGCTGCGCGA
CATCTGCTCGGATATACTGAACGTGCTCGAGAAGCATCTCATTCCATGCG
CCACATCCGGCGAAAGCAAAGTATTCTACTATAAGATGAAGGGCGACTAC
CATCGCTACCTGGCCGAATTCGCCACCGGCTCCGACCGCAAGGATGCGGC
AGAGAACTCGCTGATTGCCTACAAGGCGGCCAGCGATATTGCCATGAACG
ATCTGCCACCAACACACCCCATCCGTTTGGGCTTGGCATTGAACTTCTCG
GTGTTCTACTATGAGATTCTCAACTCGCCGGACCGCGCTTGCCGCTTGGC
GAAAGCCGCTTTCGATGATGCCATTGCCGAGTTGGATACACTGAGCGAAG
AGAGCTACAAAGACTCGACACTCATCATGCAGCTGCTGCGCGACAACCTC
ACATTATGGACGTCCGATATGCAGGCAGAAGAAGTAGACCCCAACGCAGG
TGATGGCGAGCCCAAAGAGCAAATCCAGGATGTTGAGGATCAGGACGTGT
CGTAAAAGCTTTCTAGACCAT
BS30163.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:27:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 14-3-3epsilon-RA | 789 | CG31196-PA | 1..789 | 17..805 | 3945 | 100 | Plus |
| 14-3-3epsilon-RB | 786 | CG31196-PB | 1..786 | 17..805 | 3865 | 99.6 | Plus |
| 14-3-3epsilon-RD | 783 | CG31196-PD | 1..783 | 17..805 | 3820 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:27:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 14-3-3epsilon-RA | 1239 | CG31196-RA | 160..948 | 17..805 | 3945 | 100 | Plus |
| 14-3-3epsilon-RB | 3092 | CG31196-RB | 316..1101 | 17..805 | 3865 | 99.6 | Plus |
| 14-3-3epsilon-RD | 3360 | CG31196-RD | 316..1098 | 17..805 | 3820 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:27:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18247432..18247905 | 80..553 | 2370 | 100 | Plus |
| 3R | 32079331 | 3R | 18247970..18248151 | 550..731 | 910 | 100 | Plus |
| 3R | 32079331 | 3R | 18248212..18248288 | 729..805 | 385 | 100 | Plus |
| 3R | 32079331 | 3R | 18242846..18242909 | 17..80 | 320 | 100 | Plus |
| 2R | 25286936 | 2R | 10107470..10107576 | 611..717 | 280 | 84.1 | Plus |
| 2R | 25286936 | 2R | 10106006..10106101 | 509..604 | 210 | 81.2 | Plus |
| 2R | 25286936 | 2R | 10106354..10106449 | 509..604 | 210 | 81.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:27:51 has no hits.
BS30163.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:26:28 Download gff for
BS30163.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3epsilon-RA | 316..1102 | 17..803 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:32 Download gff for
BS30163.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3epsilon-RA | 160..946 | 17..803 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:04:47 Download gff for
BS30163.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3epsilon-RA | 160..946 | 17..803 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:04:47 Download gff for
BS30163.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18247971..18248151 | 551..731 | 100 | -> | Plus |
| 3R | 18248215..18248286 | 732..803 | 100 | | Plus |
| 3R | 18242846..18242909 | 17..80 | 100 | -> | Plus |
| 3R | 18247433..18247902 | 81..550 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:32 Download gff for
BS30163.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14068568..14068631 | 17..80 | 100 | -> | Plus |
| arm_3R | 14073155..14073624 | 81..550 | 100 | -> | Plus |
| arm_3R | 14073693..14073873 | 551..731 | 100 | -> | Plus |
| arm_3R | 14073937..14074008 | 732..803 | 100 | | Plus |
BS30163.pep Sequence
Translation from 16 to 804
> BS30163.pep
MTERENNVYKAKLAEQAERYDEMVEAMKKVASMDVELTVEERNLLSVAYK
NVIGARRASWRIITSIEQKEENKGAEEKLEMIKTYRGQVEKELRDICSDI
LNVLEKHLIPCATSGESKVFYYKMKGDYHRYLAEFATGSDRKDAAENSLI
AYKAASDIAMNDLPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD
DAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQAEEVDPNAGDGEPK
EQIQDVEDQDVS*
BS30163.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:24:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 14-3-3epsilon-PA | 262 | CG31196-PA | 1..262 | 1..262 | 1331 | 100 | Plus |
| 14-3-3epsilon-PB | 261 | CG31196-PB | 1..261 | 1..262 | 1314 | 99.6 | Plus |
| 14-3-3epsilon-PD | 260 | CG31196-PD | 1..260 | 1..262 | 1309 | 99.2 | Plus |
| 14-3-3epsilon-PC | 256 | CG31196-PC | 1..256 | 1..262 | 1282 | 97.7 | Plus |
| 14-3-3zeta-PI | 248 | CG17870-PI | 5..245 | 3..245 | 829 | 67.1 | Plus |
